Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RTL3Q8N8U3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RTL3Q8N8U3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 RNU5E-5P-201ENST00000365379 116 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 MTCYBP36-201ENST00000404146 440 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 CDK8P2-201ENST00000415020 547 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 RPL7P36-201ENST00000444633 681 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 USP9YP29-201ENST00000445112 563 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 RNU6-956P-201ENST00000458868 103 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC105252.1-201ENST00000503089 286 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC091826.1-201ENST00000514065 313 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC078899.3-201ENST00000599065 212 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.87□□□□□ -1.95
RTL3Q8N8U3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.87□□□□□ -1.95
RTL3Q8N8U3 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 MIR26A1-201ENST00000362205 77 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 MIR23A-201ENST00000385245 73 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AL122016.1-201ENST00000403365 367 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 MTCO2P34-201ENST00000421994 607 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 RPS15AP5-201ENST00000436276 388 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 SNRPEP9-201ENST00000436794 238 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AL031667.1-201ENST00000440222 725 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 PGBD4P3-201ENST00000440731 581 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 RPS24P13-201ENST00000442520 397 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 SNRPFP4-201ENST00000456366 242 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC108059.3-201ENST00000456388 214 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 SNORD42A-201ENST00000459584 64 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 RPL23AP70-201ENST00000483361 460 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC055855.1-201ENST00000489563 579 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC097462.2-201ENST00000504623 481 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC116347.2-201ENST00000514912 523 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC100870.1-201ENST00000522035 505 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 GLYCAM1-201ENST00000546596 285 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC006362.1-201ENST00000567392 174 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 MIR3605-201ENST00000583214 100 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 MIR548AB-201ENST00000584917 84 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC011471.1-201ENST00000585766 187 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 ZNF861P-201ENST00000588126 639 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC122108.2-201ENST00000611946 526 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC027807.2-201ENST00000616099 408 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AC012150.2-201ENST00000621300 544 ntBASIC2.86□□□□□ -1.95
RTL3Q8N8U3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
RTL3Q8N8U3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 MTND5P29-201ENST00000458676 1807 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AL356583.2-201ENST00000426536 280 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AL589823.1-201ENST00000429577 183 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AC087499.2-201ENST00000432861 149 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AC005094.1-201ENST00000440420 368 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 SSXP1-201ENST00000453640 473 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 MTCO1P42-201ENST00000457379 726 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 RPS15AP34-201ENST00000487776 387 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 RPS29P20-201ENST00000489592 171 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 ARL2BPP4-201ENST00000506854 471 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 SNORA9.3-201ENST00000516383 129 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 RNA5SP367-201ENST00000516557 118 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 EIF4BP1-201ENST00000554881 351 ntBASIC2.85□□□□□ -1.95
RTL3Q8N8U3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RTL3Q8N8U3 AC005771.1-201ENST00000585581 349 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms