Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
BEST3Q8N1M1 AL513302.2-201ENST00000562313 1842 ntBASIC3.12□□□□□ -1.91
BEST3Q8N1M1 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AL356274.2-201ENST00000624379 3752 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC007785.2-201ENST00000598627 1916 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 CUL1P1-201ENST00000509510 2425 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 ZNF807-201ENST00000328088 1707 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU6-190P-201ENST00000384154 102 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU6-780P-201ENST00000391030 104 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU6-1158P-201ENST00000391167 107 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 EI24P2-201ENST00000397776 1076 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 BTF3P7-201ENST00000407097 488 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU2-33P-201ENST00000410344 192 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 Z99755.1-201ENST00000414048 380 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 BX679664.1-201ENST00000434429 253 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 MTND4P25-201ENST00000441039 533 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 FDX1P2-201ENST00000450769 375 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 FABP5P13-201ENST00000452144 328 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU6-261P-201ENST00000459506 102 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RN7SL442P-201ENST00000473804 320 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RPL21P13-201ENST00000488305 481 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 APOOP4-201ENST00000513530 597 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 SNORA40.12-201ENST00000516329 111 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AK6P1-201ENST00000540219 478 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC034105.3-201ENST00000565294 442 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC093788.1-201ENST00000609356 927 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AC107294.1-201ENST00000609524 467 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 AL359547.2-201ENST00000615810 418 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 MTND1P37-201ENST00000636562 264 ntBASIC3.11□□□□□ -1.91
BEST3Q8N1M1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.11□□□□□ -1.91
BEST3Q8N1M1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 UBE2L2-201ENST00000254302 429 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RNU6-288P-201ENST00000363690 104 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 SNORD115-7-201ENST00000365306 82 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RNU6-483P-201ENST00000384088 108 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 SNORD115-47-201ENST00000391226 86 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AL139397.2-201ENST00000404529 772 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RPS12P24-201ENST00000412619 387 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 CALM2P2-201ENST00000428512 440 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AL357552.1-201ENST00000445254 415 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AL121769.1-201ENST00000469473 401 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RPL39P36-201ENST00000490784 156 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AF213884.2-201ENST00000510417 903 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RNU6-718P-201ENST00000516166 105 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 Y_RNA.689-201ENST00000516589 107 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 RNA5SP503-201ENST00000517047 117 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC093331.1-201ENST00000521474 169 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC109635.3-201ENST00000529536 185 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 ADI1P3-201ENST00000549509 470 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 TRAV28-201ENST00000557548 323 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 MIR5680-201ENST00000577577 84 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AL160281.1-201ENST00000605307 311 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC009570.1-201ENST00000609599 745 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AC012409.4-201ENST00000612923 249 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 U6.98-201ENST00000637157 84 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 AF117829.1-206ENST00000621883 3802 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
BEST3Q8N1M1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.1□□□□□ -1.91
BEST3Q8N1M1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC118273.1-201ENST00000525324 3006 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms