Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AL161729.4-201ENST00000604650 476 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC068276.1-201ENST00000605793 379 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC073308.1-201ENST00000623696 305 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AL161431.1-201ENST00000618966 4205 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC022336.2-201ENST00000568966 2538 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 U3.4-201ENST00000363352 213 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 RNY3P10-201ENST00000384764 102 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC119618.1-201ENST00000434191 222 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 MTND1P28-201ENST00000435623 950 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC129850.1-201ENST00000436203 508 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC013267.1-201ENST00000458227 267 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC104472.2-201ENST00000469035 601 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 RBM43P1-201ENST00000476891 1081 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 RN7SL297P-201ENST00000483161 293 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC010587.1-201ENST00000505809 469 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 Y_RNA.688-201ENST00000516565 95 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 ARL2BPP2-201ENST00000550907 489 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC012414.6-201ENST00000568241 401 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC239868.4-201ENST00000608318 671 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC103710.2-201ENST00000609912 942 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC073114.1-201ENST00000612027 490 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.44□□□□□ -2.02
C9orf40Q8IXQ3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-511P-201ENST00000363496 107 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-701P-201ENST00000384059 107 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-217P-201ENST00000384164 104 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-198P-201ENST00000384258 104 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNU2-36P-201ENST00000410361 191 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RAC1P6-201ENST00000423911 575 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AL589872.1-201ENST00000426602 288 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 ZNF863P-201ENST00000426746 417 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC010153.1-201ENST00000432862 727 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 PGBD4P3-201ENST00000440731 581 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 DDX3P2-201ENST00000446138 111 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 SNORD97-201ENST00000459187 142 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC087588.1-201ENST00000462203 316 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RN7SL432P-201ENST00000484057 298 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 MTND1P3-201ENST00000484956 952 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC096725.1-201ENST00000514266 313 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 Y_RNA.672-201ENST00000516289 104 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNA5SP282-201ENST00000516355 108 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNA5SP337-201ENST00000517007 109 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNA5SP290-201ENST00000517133 127 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC090136.1-201ENST00000520009 240 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC011979.2-201ENST00000527568 352 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC068135.2-201ENST00000569293 1028 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC006023.1-201ENST00000603944 259 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC136601.2-201ENST00000604356 474 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC108479.2-201ENST00000617314 601 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 FRG1KP-201ENST00000623592 341 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AP003122.6-201ENST00000623831 495 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AL603839.4-201ENST00000624658 1005 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
C9orf40Q8IXQ3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 FGF7P2-201ENST00000332473 296 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 RNU4-91P-201ENST00000364778 135 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 CD24P4-201ENST00000382840 243 ntBASIC2.42□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-140P-201ENST00000384566 108 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms