Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC091133.4-201ENST00000511142 308 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC068587.5-201ENST00000528506 175 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AL163153.1-201ENST00000554223 283 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 SUB1P2-201ENST00000556401 297 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 BNIP3P9-201ENST00000603714 553 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC007684.1-201ENST00000609671 477 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC026585.1-201ENST00000619582 524 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AC018692.3-201ENST00000623929 123 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 AL359740.1-201ENST00000624340 592 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 OR5AK4P-201ENST00000635912 903 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 U6.114-201ENST00000636407 96 ntBASIC3.56□□□□□ -1.84
HERC6Q8IVU3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HERC6Q8IVU3 MTND5P17-201ENST00000418405 1603 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 OR5J1P-201ENST00000313544 939 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RNU6-282P-201ENST00000365357 103 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RNU6-190P-201ENST00000384154 102 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RNU6-192P-201ENST00000391253 100 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AL136116.1-201ENST00000403591 381 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC012498.1-201ENST00000424037 437 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 MTCO2P11-201ENST00000431069 680 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC002486.1-201ENST00000435098 391 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 MTND1P1-201ENST00000445453 368 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RN7SL330P-201ENST00000469709 307 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RPS15AP34-201ENST00000487776 387 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC108078.1-201ENST00000508073 725 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 SNORA31.1-201ENST00000515993 133 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 SNORA31.5-201ENST00000516190 133 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 SNORA70.19-201ENST00000516717 90 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RNU6-1220P-201ENST00000517126 108 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 PSMA2P1-201ENST00000526365 646 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC080078.2-201ENST00000603766 501 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC007619.2-201ENST00000605743 379 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AL359547.2-201ENST00000615810 418 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AL356321.1-201ENST00000621360 228 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 MTND5P42-201ENST00000637720 498 ntBASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
HERC6Q8IVU3 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 RNU6-288P-201ENST00000363690 104 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 RNU6-1103P-201ENST00000384150 107 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 RNU6-1035P-201ENST00000384477 107 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 RPS12P24-201ENST00000412619 387 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AC093106.2-201ENST00000428212 385 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 GPM6BP2-201ENST00000432046 144 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 RPL23AP30-201ENST00000432419 501 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 BNIP3P2-201ENST00000441221 577 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 GPM6BP1-201ENST00000446387 144 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 HMGN2P13-201ENST00000476476 274 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AC098826.3-201ENST00000603823 466 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 AL021997.1-201ENST00000605757 193 ntBASIC3.54□□□□□ -1.84
HERC6Q8IVU3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.54□□□□□ -1.84
HERC6Q8IVU3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HERC6Q8IVU3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HERC6Q8IVU3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.53□□□□□ -1.84
HERC6Q8IVU3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HERC6Q8IVU3 MIR449A-201ENST00000362113 91 ntBASIC3.53□□□□□ -1.84
HERC6Q8IVU3 Y_RNA.41-201ENST00000362646 102 ntBASIC3.53□□□□□ -1.84
HERC6Q8IVU3 RNU6-140P-201ENST00000384566 108 ntBASIC3.53□□□□□ -1.84
HERC6Q8IVU3 RNA5SP38-201ENST00000410750 119 ntBASIC3.53□□□□□ -1.84
HERC6Q8IVU3 AL591212.2-201ENST00000433923 257 ntBASIC3.53□□□□□ -1.84
HERC6Q8IVU3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.53□□□□□ -1.84
HERC6Q8IVU3 RPL23AP67-201ENST00000465341 474 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms