Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC004805.2-201ENST00000605382 482 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AL139286.2-201ENST00000606838 396 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 Z99129.1-201ENST00000612510 255 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AP003122.6-201ENST00000623831 495 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 AC010680.1-201ENST00000590024 3590 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.03□□□□□ -1.92
LDB1Q86U70 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB1Q86U70 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB1Q86U70 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 SNORA38.1-201ENST00000364172 131 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 RNU6-282P-201ENST00000365357 103 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 RNU6-190P-201ENST00000384154 102 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC114491.1-201ENST00000416095 246 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AL109913.1-201ENST00000421173 514 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.02□□□□□ -1.93
LDB1Q86U70 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.02□□□□□ -1.93
LDB1Q86U70 RPL7P46-201ENST00000425129 740 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 AL591212.2-201ENST00000433923 257 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.02□□□□□ -1.93
LDB1Q86U70 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LDB1Q86U70 AC132479.1-201ENST00000449160 144 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 MTCYBP1-201ENST00000454315 1119 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 RPL12P25-201ENST00000455592 494 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 AC023194.1-201ENST00000493084 308 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.02□□□□□ -1.93
LDB1Q86U70 ARL4AP2-201ENST00000507378 601 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC010493.1-201ENST00000513479 292 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.02□□□□□ -1.93
LDB1Q86U70 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.02□□□□□ -1.93
LDB1Q86U70 OR5B19P-201ENST00000531766 928 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC135279.1-201ENST00000543493 504 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
LDB1Q86U70 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 MIR5195-201ENST00000583555 115 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 AL121992.2-201ENST00000606262 256 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC022893.3-201ENST00000607665 437 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.02□□□□□ -1.93
LDB1Q86U70 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LDB1Q86U70 AL161629.2-201ENST00000615347 275 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC136475.10-201ENST00000620253 385 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 AC138649.3-201ENST00000622154 254 ntBASIC3.02□□□□□ -1.93
LDB1Q86U70 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
LDB1Q86U70 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.02□□□□□ -1.93
LDB1Q86U70 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LDB1Q86U70 MIR22-201ENST00000362190 85 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 RNA5SP374-201ENST00000362939 125 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 RNU6-456P-201ENST00000384493 107 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 MIR888-201ENST00000401186 77 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 SNORA11.1-201ENST00000408133 129 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.01□□□□□ -1.93
LDB1Q86U70 HSPE1P1-201ENST00000421494 318 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 RPL21P40-201ENST00000428586 483 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 MTCO2P11-201ENST00000431069 680 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.01□□□□□ -1.93
LDB1Q86U70 RPS3AP12-201ENST00000443616 753 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.01□□□□□ -1.93
LDB1Q86U70 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 FABP5P13-201ENST00000452144 328 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 RPS3AP17-201ENST00000472594 777 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 RPS26P21-201ENST00000475397 348 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AC116562.3-201ENST00000506136 177 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.01□□□□□ -1.93
LDB1Q86U70 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.01□□□□□ -1.93
LDB1Q86U70 Y_RNA.689-201ENST00000516589 107 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 RNA5SP165-201ENST00000517142 115 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LDB1Q86U70 AC068587.5-201ENST00000528506 175 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LDB1Q86U70 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.01□□□□□ -1.93
LDB1Q86U70 MTCO3P24-201ENST00000572729 782 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.01□□□□□ -1.93
LDB1Q86U70 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.01□□□□□ -1.93
LDB1Q86U70 AL133393.1-201ENST00000603277 287 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AL442067.2-201ENST00000614033 363 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 AC130324.3-201ENST00000614165 542 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.01□□□□□ -1.93
LDB1Q86U70 GABRG2-229ENST00000641017 3628 ntBASIC3.01□□□□□ -1.93
LDB1Q86U70 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3□□□□□ -1.93
LDB1Q86U70 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3□□□□□ -1.93
LDB1Q86U70 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3□□□□□ -1.93
LDB1Q86U70 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
LDB1Q86U70 RNU6-74P-201ENST00000384235 107 ntBASIC3□□□□□ -1.93
LDB1Q86U70 SNORA24.1-201ENST00000384401 135 ntBASIC3□□□□□ -1.93
LDB1Q86U70 RNU2-66P-201ENST00000410650 161 ntBASIC3□□□□□ -1.93
LDB1Q86U70 RNU2-68P-201ENST00000410878 191 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AL592045.1-201ENST00000429867 352 ntBASIC3□□□□□ -1.93
LDB1Q86U70 RPL36AP53-201ENST00000432891 316 ntBASIC3□□□□□ -1.93
LDB1Q86U70 MTATP6P16-201ENST00000434543 526 ntBASIC3□□□□□ -1.93
LDB1Q86U70 AL714022.1-201ENST00000439897 151 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms