Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC012213.3-201ENST00000577199 777 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 MIR3913-1-201ENST00000577744 102 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 MIR2682-201ENST00000580305 110 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 NRBF2P5-201ENST00000603087 788 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC007619.2-201ENST00000605743 379 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 RPL23AP88-201ENST00000605759 454 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AL161734.1-201ENST00000609720 557 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC096577.2-201ENST00000611455 153 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 MIR7112-201ENST00000616126 65 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC007998.5-201ENST00000622938 237 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 AC073346.2-201ENST00000624724 2058 ntBASIC2.96□□□□□ -1.94
NUP54Q7Z3B4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 OR5J1P-201ENST00000313544 939 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RNU6-1167P-201ENST00000363227 94 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 SNORD56.3-201ENST00000363507 71 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RNU6-169P-201ENST00000365336 107 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 SMIM11P1-201ENST00000369586 178 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RNU6-39P-201ENST00000384344 107 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MIR558-201ENST00000384920 94 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RNU6-817P-201ENST00000391083 104 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AL139397.2-201ENST00000404529 772 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RPL32P35-201ENST00000415214 394 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC016907.1-201ENST00000419483 435 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MED13P1-201ENST00000428342 171 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 CYCSP32-201ENST00000440548 321 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC009296.1-201ENST00000443146 155 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC004924.1-201ENST00000480160 781 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MTND3P5-201ENST00000512798 333 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MTCO3P28-201ENST00000513351 515 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RN7SKP298-201ENST00000515950 94 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 SNORA31.18-201ENST00000517043 134 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 RNU6-430P-201ENST00000517078 107 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MTCO2P4-201ENST00000517968 247 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MTCYBP33-201ENST00000575007 1130 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MIR3616-201ENST00000584070 92 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC104763.2-201ENST00000604179 382 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC136601.2-201ENST00000604356 474 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC007363.1-201ENST00000604736 620 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC064807.4-201ENST00000607201 407 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AL589743.7-201ENST00000612637 233 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AC005332.10-201ENST00000612725 619 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 AL589994.2-201ENST00000621124 579 ntBASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.95□□□□□ -1.94
NUP54Q7Z3B4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 FTLP6-201ENST00000355274 422 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 RNU1-109P-201ENST00000383960 147 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AL512633.1-201ENST00000399931 655 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AL663109.1-201ENST00000411498 844 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 BX295541.1-201ENST00000417774 250 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 RPL31P35-201ENST00000431058 377 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 RPL36AP6-201ENST00000435770 321 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 RPL23AP20-201ENST00000447965 421 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC115115.1-201ENST00000449927 248 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 RPL37P6-201ENST00000460682 294 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 MRPS17P3-201ENST00000465453 385 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC007182.2-201ENST00000489251 402 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 SUMO2P6-201ENST00000505273 288 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 MRPS36P2-201ENST00000512569 299 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 RNA5SP290-201ENST00000517133 127 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC090572.1-201ENST00000519251 160 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 GLYCAM1-201ENST00000546596 285 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 BNIP3P22-201ENST00000593399 556 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC068790.2-201ENST00000602601 557 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC174048.1-201ENST00000603389 144 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC098826.3-201ENST00000603823 466 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AL161798.1-201ENST00000604630 131 ntBASIC2.94□□□□□ -1.94
NUP54Q7Z3B4 AC012468.1-201ENST00000604888 430 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms