Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 DYNLT3P1-201ENST00000378574 347 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 CALM2P3-201ENST00000400429 449 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-648P-201ENST00000410190 107 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RNA5SP274-201ENST00000410484 108 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 YPEL5P1-201ENST00000419731 367 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AL356867.1-201ENST00000429623 299 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RPL23AP30-201ENST00000432419 501 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 TAAR7P-201ENST00000436141 242 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RPS15AP9-201ENST00000439856 381 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RPS12P18-201ENST00000442381 270 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC003071.1-201ENST00000451219 789 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC087588.1-201ENST00000462203 316 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC126389.1-201ENST00000477436 290 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RPS3AP14-201ENST00000483907 780 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 RN7SKP272-201ENST00000516988 232 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC136619.2-201ENST00000563361 631 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC024619.4-201ENST00000580924 316 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC098848.2-201ENST00000588023 330 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 YPEL5P2-201ENST00000605553 359 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AL121992.2-201ENST00000606262 256 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC004832.5-201ENST00000608677 401 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC096577.2-201ENST00000611455 153 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AC090517.2-201ENST00000614966 680 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AL157786.1-207ENST00000627771 695 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AL355596.1-201ENST00000565399 3996 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 AF117829.1-206ENST00000621883 3802 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 MTND5P17-201ENST00000418405 1603 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-1120P-201ENST00000362988 108 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-606P-201ENST00000384721 111 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 SNORD67-201ENST00000390833 111 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-817P-201ENST00000391083 104 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 RNU2-39P-201ENST00000410604 198 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 FCF1P9-201ENST00000412546 282 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC245054.2-201ENST00000415639 319 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AL353193.1-201ENST00000421444 268 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 RPL21P40-201ENST00000428586 483 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC006946.1-201ENST00000429106 328 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC092473.1-201ENST00000441098 221 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC013267.1-201ENST00000458227 267 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AL049874.1-201ENST00000489560 388 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC079382.1-201ENST00000493346 557 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 OR5G4P-201ENST00000525251 760 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AP001646.1-201ENST00000527936 915 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC174048.1-201ENST00000603389 144 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC025449.1-201ENST00000603896 529 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC013553.2-201ENST00000604244 589 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC126118.1-201ENST00000607744 628 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 AC092794.1-201ENST00000612734 582 ntBASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.6□□□□□ -1.83
SYNE3Q6ZMZ3 MIR22-201ENST00000362190 85 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-456P-201ENST00000384493 107 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 MIR1-2-201ENST00000384961 85 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 RPL21P3-201ENST00000395517 478 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AL139397.2-201ENST00000404529 772 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 UBE2D3P2-201ENST00000424409 445 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AC091390.3-201ENST00000426478 338 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 RPL7L1P10-201ENST00000427790 463 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 MTATP6P16-201ENST00000434543 526 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 RPL23AP20-201ENST00000447965 421 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 MTND2P24-201ENST00000453434 806 ntBASIC3.59□□□□□ -1.83
SYNE3Q6ZMZ3 AL356010.1-201ENST00000456364 102 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms