Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.37□□□□□ -1.87
ZNF549Q6P9A3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC073343.1-201ENST00000328239 651 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-188P-201ENST00000364207 107 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNVU1-3-201ENST00000364313 161 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-61P-201ENST00000365528 109 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-641P-201ENST00000384006 107 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-474P-201ENST00000384243 107 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-43P-201ENST00000384302 107 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-738P-201ENST00000384531 106 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MIR23B-201ENST00000384832 97 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MIR200C-201ENST00000384980 68 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.579-201ENST00000390939 94 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 SNORD37.1-201ENST00000390968 65 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL606923.1-201ENST00000406616 190 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNA5SP239-201ENST00000410218 129 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNA5SP107-201ENST00000411358 122 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL356968.1-201ENST00000416622 474 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RPL23AP82-202ENST00000427528 469 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 HSPD1P21-201ENST00000436541 245 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.639-201ENST00000458981 102 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RPS4XP22-201ENST00000480755 780 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-864P-201ENST00000516256 108 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-327P-201ENST00000516270 127 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU6-1038P-201ENST00000516516 104 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC026403.1-201ENST00000518938 295 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 FAM60DP-201ENST00000524174 632 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 ELOCP31-201ENST00000540463 467 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL121821.2-201ENST00000556081 394 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MIR3158-1-201ENST00000583596 81 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MIR3942-201ENST00000585264 109 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL022099.1-201ENST00000604551 712 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MIR7851-201ENST00000610611 160 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC006329.2-201ENST00000611491 394 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC006133.1-201ENST00000617106 264 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC243312.2-201ENST00000623340 601 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AC134503.1-201ENST00000633048 54 ntBASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
ZNF549Q6P9A3 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RNU1-75P-201ENST00000347264 129 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 SNORD115-7-201ENST00000365306 82 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.384-201ENST00000383909 102 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 Y_RNA.414-201ENST00000384011 101 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 SNORA24.1-201ENST00000384401 135 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 SNORA75.4-201ENST00000391278 119 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC126124.2-201ENST00000413542 321 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 PSMA2P3-201ENST00000429685 675 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC091286.1-201ENST00000431233 461 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RPL29P29-201ENST00000448725 423 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 snoU109.4-201ENST00000458953 143 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RNU6-1208P-201ENST00000459588 107 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RPS15AP36-201ENST00000492022 382 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RPL7P47-201ENST00000497299 556 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC098591.2-201ENST00000510152 315 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RNU6-1045P-201ENST00000516321 107 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 SNORA67.7-201ENST00000516664 135 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 RNA5SP503-201ENST00000517047 117 ntBASIC3.35□□□□□ -1.87
ZNF549Q6P9A3 SNORA25.17-201ENST00000517184 124 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms