Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF40BQ6NWY9 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF40BQ6NWY9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
PRPF40BQ6NWY9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
PRPF40BQ6NWY9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 Y_RNA.455-201ENST00000384230 98 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-45P-201ENST00000384471 107 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 SNORD3H-201ENST00000384486 214 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-817P-201ENST00000391083 104 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 HSPE1P8-201ENST00000406997 288 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 HMGB3P2-201ENST00000411913 584 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 PPP1R11P2-201ENST00000423543 382 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AL160275.3-201ENST00000423876 471 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AC008267.5-201ENST00000424928 265 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 RPL7L1P1-201ENST00000448259 785 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 HMGB3P30-201ENST00000457863 606 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AC022493.2-201ENST00000506122 481 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-264P-201ENST00000517134 104 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 SRGNP1-201ENST00000603392 451 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AL161423.1-201ENST00000613700 262 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 AL049555.1-201ENST00000562834 1933 ntBASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.12□□□□□ -1.59
PRPF40BQ6NWY9 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 DPH3P2-201ENST00000422618 250 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC091286.1-201ENST00000431233 461 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 TBCAP1-201ENST00000436520 327 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 HLA-N-201ENST00000437516 135 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC084198.1-201ENST00000477747 402 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 MRPS35P2-201ENST00000508242 191 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 SCARNA16.2-201ENST00000516520 172 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-635P-201ENST00000516651 102 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC026403.1-201ENST00000518938 295 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC012119.1-201ENST00000603184 222 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC007792.1-201ENST00000623023 402 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 AC009093.8-201ENST00000641769 292 ntBASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.11□□□□□ -1.59
PRPF40BQ6NWY9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 RNU6-266P-201ENST00000364225 107 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 RPL7AP73-201ENST00000413490 353 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 NUP35P1-201ENST00000422734 947 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AC091390.3-201ENST00000426478 338 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AC097713.2-201ENST00000430199 356 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 CBX3P6-201ENST00000430257 527 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AC006011.1-201ENST00000442758 349 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 GMPSP1-201ENST00000514075 579 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 RN7SKP258-201ENST00000517151 304 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AC005899.2-201ENST00000584353 90 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AC019176.2-201ENST00000611579 315 ntBASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PRPF40BQ6NWY9 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 ZNF285B-201ENST00000561698 1767 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 AC005592.1-201ENST00000566527 1640 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 RNU1-108P-201ENST00000362556 161 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 Y_RNA.188-201ENST00000363952 111 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 Y_RNA.389-201ENST00000383924 113 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 Y_RNA.480-201ENST00000384364 102 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 MIR483-201ENST00000385070 76 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 AC093151.1-201ENST00000427711 313 ntBASIC5.09□□□□□ -1.59
PRPF40BQ6NWY9 USP9YP30-201ENST00000430729 455 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms