Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
USPL1Q5W0Q7 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 RNU6-371P-201ENST00000364283 108 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.556-201ENST00000384677 113 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC099799.1-201ENST00000439809 192 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 RN7SL323P-201ENST00000494712 295 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 SNORA31.22-201ENST00000517204 135 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC026403.1-201ENST00000518938 295 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC007179.3-201ENST00000604976 235 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 AC010680.4-201ENST00000605334 543 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
USPL1Q5W0Q7 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 RNA5SP52-201ENST00000362448 134 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 RNU4-44P-201ENST00000363050 141 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 RNU6-525P-201ENST00000363685 104 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 SNORA57.3-201ENST00000411095 141 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AL358472.1-201ENST00000431295 329 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC073063.1-201ENST00000434352 607 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 GSTA11P-201ENST00000452866 669 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 MTATP8P1-201ENST00000467115 207 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 RPS26P28-201ENST00000470806 348 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC092451.1-201ENST00000480211 153 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC022493.2-201ENST00000506122 481 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 GMPSP1-201ENST00000514075 579 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 MTND6P33-201ENST00000571794 183 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 MIR15A-201ENST00000607334 83 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 AC092435.4-201ENST00000623012 4159 ntBASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
USPL1Q5W0Q7 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 SDAD1P2-201ENST00000441308 2028 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 RNU1-108P-201ENST00000362556 161 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 RNU6-288P-201ENST00000363690 104 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 RNU6-1318P-201ENST00000365389 103 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 SNORA9-201ENST00000384215 133 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.496-201ENST00000384444 101 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 RNU6-847P-201ENST00000411115 108 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 BX842559.1-201ENST00000419615 532 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AC097713.2-201ENST00000430199 356 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AC108145.1-201ENST00000503770 153 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 RNU1-95P-201ENST00000516357 160 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 RNU1-128P-201ENST00000516704 160 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AC113195.1-201ENST00000579952 141 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 SRGNP1-201ENST00000603392 451 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AC002044.1-201ENST00000606707 158 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AL034408.1-202ENST00000636088 415 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AL732372.2-225ENST00000642124 456 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 AC005183.1-201ENST00000603687 1979 ntBASIC5.13□□□□□ -1.59
USPL1Q5W0Q7 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.2-201ENST00000362330 96 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 SNORA60-201ENST00000362396 134 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 RNU6-1329P-201ENST00000365664 107 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 SNORA5A-201ENST00000384111 134 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 Y_RNA.574-201ENST00000384766 95 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 RNU6-55P-201ENST00000411092 107 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 RBMY1KP-201ENST00000423480 476 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 USP9YP30-201ENST00000430729 455 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 HMGB3P30-201ENST00000457863 606 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC092436.3-201ENST00000511788 257 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 SCARNA16.2-201ENST00000516520 172 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC087369.1-201ENST00000520775 996 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AL121603.1-201ENST00000553815 142 ntBASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.12□□□□□ -1.59
USPL1Q5W0Q7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms