Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 HMGN2P30-201ENST00000423237 256 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 RPL9P33-201ENST00000484311 566 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC105417.1-201ENST00000514691 285 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC103843.2-201ENST00000530523 682 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AL391261.3-201ENST00000557194 520 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC068790.6-201ENST00000602558 258 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AL161629.2-201ENST00000615347 275 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 CR392039.5-201ENST00000623201 510 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 AC139792.3-201ENST00000623525 224 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 U2.21-201ENST00000637295 81 ntBASIC3.56□□□□□ -1.84
CCDC38Q502W7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.56□□□□□ -1.84
CCDC38Q502W7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC38Q502W7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 MIR148B-201ENST00000362252 99 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 RNU6-1029P-201ENST00000384109 107 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 RNU6-1215P-201ENST00000384441 102 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL354719.1-201ENST00000406535 843 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL158156.1-201ENST00000422509 473 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL160275.3-201ENST00000423876 471 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC018644.1-201ENST00000429934 551 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 GOT2P5-201ENST00000433995 546 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC027673.1-201ENST00000456245 405 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 HMGN1P18-201ENST00000457642 277 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 RPS29P15-201ENST00000458329 171 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 RNU7-23P-201ENST00000459465 62 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 SRRM1P2-201ENST00000464531 1192 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC245166.1-201ENST00000521012 253 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 MIR1273C-201ENST00000578669 77 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL355598.1-201ENST00000604169 202 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL670379.4-201ENST00000605279 254 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 AP001330.5-201ENST00000607176 411 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AC008264.2-201ENST00000610193 3731 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 ZNF285B-201ENST00000561698 1767 ntBASIC3.55□□□□□ -1.84
CCDC38Q502W7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.55□□□□□ -1.84
CCDC38Q502W7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC38Q502W7 AL079305.1-201ENST00000623159 3008 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC38Q502W7 RNU6-1287P-201ENST00000362914 107 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 RNU6-778P-201ENST00000363269 103 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 RNU6-1060P-201ENST00000384664 107 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 RNA5SP111-201ENST00000411386 101 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 RPL26P27-201ENST00000414397 437 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 OR6C66P-201ENST00000414917 930 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 HSPE1P1-201ENST00000421494 318 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AL596276.1-201ENST00000434465 418 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC008264.1-201ENST00000447612 367 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 MTND1P18-201ENST00000448191 573 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 RNU7-63P-201ENST00000459054 62 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 RPL23AP67-201ENST00000465341 474 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC126182.1-201ENST00000478134 357 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC233702.1-201ENST00000482905 502 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC117522.3-201ENST00000507974 584 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC104619.4-201ENST00000510773 249 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 SNORA31.21-201ENST00000517180 77 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 AC107934.2-201ENST00000518653 310 ntBASIC3.54□□□□□ -1.84
CCDC38Q502W7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC38Q502W7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms