Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC010486.1-201ENST00000511793 424 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 YPEL5P3-201ENST00000547227 352 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 OR11H5P-201ENST00000554039 926 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 MTCO3P23-201ENST00000561363 289 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AMZ2P1-203ENST00000565833 850 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AC011712.1-201ENST00000588959 234 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AL138880.2-201ENST00000616214 239 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AC068831.7-201ENST00000616954 363 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 AC022418.1-201ENST00000624118 445 ntBASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CCDC144BQ3MJ40 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 FTLP6-201ENST00000355274 422 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 Y_RNA.480-201ENST00000384364 102 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 HMGN2P8-201ENST00000391458 268 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC022028.1-201ENST00000412054 408 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 RPL21P90-201ENST00000415692 466 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AL669831.1-202ENST00000428504 417 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC091286.1-201ENST00000431233 461 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 GTF2IP13-201ENST00000438487 386 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 SSXP4-201ENST00000451349 245 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 RNU7-167P-201ENST00000459160 62 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 RN7SL93P-201ENST00000463035 293 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AP000852.1-201ENST00000472460 573 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 MTCO3P9-201ENST00000506989 781 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 RNU6-189P-201ENST00000516120 101 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 RNU1-95P-201ENST00000516357 160 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 RNU1-128P-201ENST00000516704 160 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AL355598.1-201ENST00000604169 202 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC092807.2-201ENST00000609367 243 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC093913.1-201ENST00000614178 329 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AP003400.5-201ENST00000624827 617 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 AC100810.6-201ENST00000638068 285 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 NCAPGP1-201ENST00000505112 1814 ntBASIC4.49□□□□□ -1.69
CCDC144BQ3MJ40 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AL353746.1-201ENST00000566293 6881 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC005183.1-201ENST00000603687 1979 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 SNORA72.1-201ENST00000363485 129 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 Y_RNA.604-201ENST00000410574 102 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 POLHP1-201ENST00000411806 470 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC098614.3-201ENST00000438957 440 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 RPL7P49-201ENST00000471402 708 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 RPL21P13-201ENST00000488305 481 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 CCDC34P1-201ENST00000507441 517 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 HIGD1AP13-201ENST00000509878 289 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC026726.1-201ENST00000512859 601 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 RNU2-69P-201ENST00000516061 100 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 NARSP2-201ENST00000518524 679 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC026403.1-201ENST00000518938 295 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC087499.8-201ENST00000578406 226 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 MIR5583-1-201ENST00000580941 59 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AL034408.1-202ENST00000636088 415 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC009093.8-201ENST00000641769 292 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 AC121333.1-201ENST00000567488 2709 ntBASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC144BQ3MJ40 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 MIR412-201ENST00000362142 91 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 RNA5SP399-201ENST00000364003 117 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 SNORA5A-201ENST00000384111 134 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 SNORA16.2-201ENST00000390991 127 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 RNU6-510P-201ENST00000391239 108 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 MIR888-201ENST00000401186 77 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AL162578.1-201ENST00000406202 378 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 SNORA3.3-201ENST00000408712 125 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 NEK4P1-201ENST00000433383 879 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AC073063.1-201ENST00000434352 607 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 PRPS1P1-201ENST00000445305 876 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 PRSS3P4-201ENST00000453323 162 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 UBE2CP3-201ENST00000502715 450 ntBASIC4.47□□□□□ -1.69
CCDC144BQ3MJ40 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms