Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXF1Q12946 MTND5P14-201ENST00000441481 1267 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 PSPHP1-201ENST00000450062 261 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXF1Q12946 MTND2P24-201ENST00000453434 806 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXF1Q12946 RNU7-26P-201ENST00000458980 63 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC021382.1-201ENST00000483523 359 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 EIF4EP3-201ENST00000498782 656 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC138853.1-201ENST00000503549 823 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC096571.1-202ENST00000506634 735 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC079395.1-201ENST00000510981 262 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC107393.1-201ENST00000512403 346 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC008837.2-201ENST00000513076 418 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 RNU6-295P-201ENST00000516901 104 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.62□□□□□ -2.15
FOXF1Q12946 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC023824.2-201ENST00000566185 400 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 PART1_2.1-201ENST00000612397 250 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 AL603758.1-201ENST00000618654 241 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC109809.1-201ENST00000619665 545 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AC084768.2-201ENST00000622736 221 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.62□□□□□ -2.15
FOXF1Q12946 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
FOXF1Q12946 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
FOXF1Q12946 AC010329.5-201ENST00000623497 2174 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 HSPA8P4-201ENST00000511877 1920 ntBASIC1.62□□□□□ -2.15
FOXF1Q12946 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
FOXF1Q12946 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.61□□□□□ -2.15
FOXF1Q12946 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXF1Q12946 RNU6-223P-201ENST00000362830 107 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 RNU6-1078P-201ENST00000364522 103 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 Y_RNA.311-201ENST00000365068 96 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 RNU6-413P-201ENST00000384115 107 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AL590084.2-201ENST00000401481 382 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 ERHP2-201ENST00000402323 299 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 MTCYBP38-201ENST00000417160 1123 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 HMGN2P19-201ENST00000425149 265 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC008850.1-201ENST00000427546 362 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 Z80107.1-201ENST00000436830 412 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 SNRPEP7-201ENST00000438350 220 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 RPL23AP76-201ENST00000441860 458 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 USP9YP15-201ENST00000442391 422 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC002381.1-201ENST00000447049 280 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 ZNF886P-201ENST00000450781 723 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXF1Q12946 BX322784.1-201ENST00000455793 1077 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 ATG12P2-201ENST00000456830 416 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AP1S2P1-201ENST00000457344 379 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AL049874.1-201ENST00000489560 388 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXF1Q12946 RNA5SP291-201ENST00000517222 105 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXF1Q12946 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
FOXF1Q12946 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.61□□□□□ -2.15
FOXF1Q12946 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.61□□□□□ -2.15
FOXF1Q12946 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.61□□□□□ -2.15
FOXF1Q12946 AC007375.1-201ENST00000554513 578 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AL391261.3-201ENST00000557194 520 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 MIR4419B-201ENST00000577260 68 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 MIR4298-201ENST00000584380 73 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.61□□□□□ -2.15
FOXF1Q12946 AC136601.2-201ENST00000604356 474 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC008498.1-201ENST00000613012 531 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AL049777.1-201ENST00000622740 518 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC231657.1-201ENST00000624313 397 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 PISRT1-201ENST00000626175 531 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC004808.1-201ENST00000627671 721 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 MIR7515-201ENST00000637837 67 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 AC013437.2-201ENST00000639587 677 ntBASIC1.61□□□□□ -2.15
FOXF1Q12946 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
FOXF1Q12946 OR4G2P-202ENST00000641004 1759 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 AC099786.3-201ENST00000565735 1410 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 RNU6-97P-201ENST00000363387 104 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 Y_RNA.472-201ENST00000384322 102 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 RPL23AP29-201ENST00000397284 453 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 AL136310.1-201ENST00000404926 654 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 CCNG1P1-201ENST00000406783 885 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 RPL35AP22-201ENST00000436855 335 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 OR10R1P-201ENST00000441524 1141 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 MTCO1P53-201ENST00000441633 699 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.6□□□□□ -2.15
FOXF1Q12946 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.6□□□□□ -2.15
FOXF1Q12946 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.6□□□□□ -2.15
FOXF1Q12946 RPS20P20-201ENST00000460498 340 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 RPL21P99-201ENST00000480369 423 ntBASIC1.6□□□□□ -2.15
FOXF1Q12946 AC104564.1-201ENST00000493028 407 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms