Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC123912.3-201ENST00000600907 1367 ntBASIC1.39□□□□□ -2.19
HMGXB3Q12766 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HMGXB3Q12766 SNORD114-2-201ENST00000363953 78 ntBASIC1.38□□□□□ -2.19
HMGXB3Q12766 MTCO3P46-201ENST00000425787 232 ntBASIC1.38□□□□□ -2.19
HMGXB3Q12766 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.38□□□□□ -2.19
HMGXB3Q12766 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
HMGXB3Q12766 SNORA31.18-201ENST00000517043 134 ntBASIC1.38□□□□□ -2.19
HMGXB3Q12766 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGXB3Q12766 MIR548Y-201ENST00000582739 110 ntBASIC1.38□□□□□ -2.19
HMGXB3Q12766 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.38□□□□□ -2.19
HMGXB3Q12766 AL627230.6-201ENST00000611129 280 ntBASIC1.38□□□□□ -2.19
HMGXB3Q12766 AL355810.1-201ENST00000614629 552 ntBASIC1.38□□□□□ -2.19
HMGXB3Q12766 OR4G2P-201ENST00000328113 903 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 ARL2BPP3-201ENST00000421226 480 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 Z99497.1-201ENST00000421282 135 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 MRPS36P1-201ENST00000421291 307 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGXB3Q12766 RNF2P1-201ENST00000442955 1010 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 RNU7-26P-201ENST00000458980 63 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 AC097493.1-201ENST00000463958 372 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.37□□□□□ -2.19
HMGXB3Q12766 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGXB3Q12766 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.37□□□□□ -2.19
HMGXB3Q12766 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.37□□□□□ -2.19
HMGXB3Q12766 AL355297.2-201ENST00000604792 129 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 AL161629.2-201ENST00000615347 275 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 AC109809.1-201ENST00000619665 545 ntBASIC1.37□□□□□ -2.19
HMGXB3Q12766 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
HMGXB3Q12766 MTCO3P12-201ENST00000416718 547 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 TMEM167AP1-201ENST00000423409 219 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGXB3Q12766 ZNF965P-201ENST00000432501 817 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 AC009296.1-201ENST00000443146 155 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 SNRPGP6-201ENST00000451124 220 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.36□□□□□ -2.19
HMGXB3Q12766 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.36□□□□□ -2.19
HMGXB3Q12766 EEF1B2P4-201ENST00000551398 348 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGXB3Q12766 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.36□□□□□ -2.19
HMGXB3Q12766 BNIP3P7-201ENST00000605641 516 ntBASIC1.36□□□□□ -2.19
HMGXB3Q12766 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
HMGXB3Q12766 AC012497.1-201ENST00000429392 575 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AC023824.2-201ENST00000566185 400 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AGGF1P5-201ENST00000567900 919 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 RNU6-942P-201ENST00000363002 107 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 CISD1P1-201ENST00000393907 327 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AL356320.2-201ENST00000417263 507 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGXB3Q12766 AC079780.1-201ENST00000428259 207 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AL121769.1-201ENST00000469473 401 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AC096751.1-202ENST00000502691 1067 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 AC108157.1-201ENST00000510511 539 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.35□□□□□ -2.19
HMGXB3Q12766 AC022662.1-201ENST00000580252 331 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 OR1M4P-201ENST00000589199 287 ntBASIC1.35□□□□□ -2.19
HMGXB3Q12766 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.35□□□□□ -2.19
HMGXB3Q12766 Y_RNA.62-201ENST00000362840 99 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 RNU6-1293P-201ENST00000384077 107 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 RNU6-1235P-201ENST00000384559 107 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 MIR508-201ENST00000384857 115 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 RNU6-244P-201ENST00000391028 104 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.34□□□□□ -2.2
HMGXB3Q12766 AC118469.1-201ENST00000442943 488 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 RNU6-498P-201ENST00000459468 107 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 AC026801.1-201ENST00000497178 464 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.34□□□□□ -2.2
HMGXB3Q12766 CYCSP23-201ENST00000519781 313 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 AL160236.1-201ENST00000556317 195 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.34□□□□□ -2.2
HMGXB3Q12766 HSPE1P7-201ENST00000604681 321 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 RNU6-156P-201ENST00000621869 107 ntBASIC1.34□□□□□ -2.2
HMGXB3Q12766 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
HMGXB3Q12766 SFR1P1-201ENST00000403720 688 ntBASIC1.33□□□□□ -2.2
HMGXB3Q12766 MTCO3P4-201ENST00000419236 787 ntBASIC1.33□□□□□ -2.2
HMGXB3Q12766 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGXB3Q12766 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.33□□□□□ -2.2
HMGXB3Q12766 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.33□□□□□ -2.2
HMGXB3Q12766 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGXB3Q12766 AL355812.1-201ENST00000603215 216 ntBASIC1.33□□□□□ -2.2
HMGXB3Q12766 AL161423.1-201ENST00000613700 262 ntBASIC1.33□□□□□ -2.2
HMGXB3Q12766 AP001486.3-201ENST00000615334 372 ntBASIC1.33□□□□□ -2.2
HMGXB3Q12766 AL022578.1-201ENST00000439330 1433 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 SNORA3A-201ENST00000364113 130 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 MIR1197-201ENST00000408818 88 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 AL356867.1-201ENST00000429623 299 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC000111.3-201ENST00000433478 193 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AL645638.1-201ENST00000440519 361 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 RNU1-98P-201ENST00000458992 160 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC104806.1-201ENST00000508720 308 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC1.32□□□□□ -2.2
HMGXB3Q12766 AC108120.2-201ENST00000512973 294 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 AP003497.1-201ENST00000528472 562 ntBASIC1.32□□□□□ -2.2
HMGXB3Q12766 MIR3616-201ENST00000584070 92 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms