Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 MIR558-201ENST00000384920 94 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 MIR181B1-201ENST00000385240 110 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.75□□□□□ -1.97
SCN1BQ07699 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SCN1BQ07699 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN1BQ07699 RPL19P1-201ENST00000411635 428 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AC127391.1-201ENST00000411737 98 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.75□□□□□ -1.97
SCN1BQ07699 RBMY2UP-201ENST00000453474 324 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 SNRPGP9-201ENST00000456025 225 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN1BQ07699 MTCO2P6-201ENST00000463134 685 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC026427.2-201ENST00000506228 536 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC108078.2-201ENST00000510750 236 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.75□□□□□ -1.97
SCN1BQ07699 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC005476.1-201ENST00000554427 397 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AL157871.3-201ENST00000557231 293 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AC034105.4-201ENST00000568304 277 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN1BQ07699 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AL158032.1-201ENST00000605401 106 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AL157817.1-201ENST00000614264 790 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AL133173.2-201ENST00000614270 90 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AL355365.1-201ENST00000616480 294 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 CU459211.1-201ENST00000635667 749 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 AC080128.1-201ENST00000474389 1917 ntBASIC2.75□□□□□ -1.97
SCN1BQ07699 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
SCN1BQ07699 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN1BQ07699 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SCN1BQ07699 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN1BQ07699 AC004944.1-201ENST00000517807 3059 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 RNY1P12-201ENST00000364251 105 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 MIR134-201ENST00000385258 73 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 SNORA40.3-201ENST00000390964 122 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 RNU6-195P-201ENST00000411352 109 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AC114491.1-201ENST00000416095 246 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN1BQ07699 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN1BQ07699 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN1BQ07699 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN1BQ07699 AC122718.1-201ENST00000439448 744 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AL022238.1-201ENST00000442557 355 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN1BQ07699 FAM133DP-201ENST00000464802 691 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 RN7SL633P-201ENST00000488974 297 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN1BQ07699 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN1BQ07699 SAP18P1-201ENST00000512058 390 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN1BQ07699 SNORA31.18-201ENST00000517043 134 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AC026407.1-201ENST00000518369 204 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 NCAPGP2-201ENST00000557911 754 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN1BQ07699 AC078899.3-201ENST00000599065 212 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AL356280.1-201ENST00000603614 379 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AL359198.2-201ENST00000611836 194 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN1BQ07699 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN1BQ07699 AC110994.2-201ENST00000635481 492 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN1BQ07699 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.74□□□□□ -1.97
SCN1BQ07699 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN1BQ07699 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN1BQ07699 OR5J1P-201ENST00000313544 939 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.73□□□□□ -1.97
SCN1BQ07699 Y_RNA.33-201ENST00000362591 102 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 RNU6-19P-201ENST00000384718 107 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 RNY3P10-201ENST00000384764 102 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 MIR490-201ENST00000384865 128 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 MIR147B-201ENST00000390185 80 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 RNU2-39P-201ENST00000410604 198 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 USP9YP6-201ENST00000413550 854 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 MED13P1-201ENST00000428342 171 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN1BQ07699 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.73□□□□□ -1.97
SCN1BQ07699 RPL36AP6-201ENST00000435770 321 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 ATP5C1P1-201ENST00000441945 895 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 AL078601.1-201ENST00000444542 271 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 NIPA2P5-201ENST00000452282 464 ntBASIC2.73□□□□□ -1.97
SCN1BQ07699 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms