Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
HIST1H1AQ02539 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HIST1H1AQ02539 MIR30A-201ENST00000385092 71 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 MIR517C-201ENST00000385103 95 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 SNORA67.6-201ENST00000391093 99 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 SNORA26.9-201ENST00000391322 122 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AL109755.1-201ENST00000401791 649 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 UBE2V1P11-201ENST00000411559 285 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AL449283.1-202ENST00000418249 604 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 RPL30P13-201ENST00000418873 348 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AL121882.1-201ENST00000422893 417 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HIST1H1AQ02539 RNA5SP165-201ENST00000517142 115 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 IGJP1-201ENST00000522682 475 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AP000873.5-201ENST00000533906 236 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AL132857.1-201ENST00000555180 708 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 SULT1C2P1-202ENST00000562418 459 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AC026271.5-201ENST00000577873 130 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AL035411.2-201ENST00000604022 421 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 AC099842.1-201ENST00000619919 596 ntBASIC1.13□□□□□ -2.23
HIST1H1AQ02539 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.13□□□□□ -2.23
HIST1H1AQ02539 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 ZNF29P-201ENST00000225587 168 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 MIR525-201ENST00000384978 85 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 BTF3L4P2-201ENST00000392798 346 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 MIR1323-201ENST00000408090 73 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 NDUFS5P4-201ENST00000412983 318 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 VN1R108P-201ENST00000431580 830 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 MTND2P21-201ENST00000436242 1042 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AMD1P1-201ENST00000457220 922 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AP003066.2-201ENST00000529375 555 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AP003973.1-201ENST00000604639 691 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AL445493.3-201ENST00000619568 477 ntBASIC1.12□□□□□ -2.23
HIST1H1AQ02539 AP005901.5-201ENST00000545779 1796 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AP000776.1-201ENST00000530032 1663 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 RNU6-115P-201ENST00000364310 107 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 RNA5SP190-201ENST00000365222 118 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 SNORD26-201ENST00000384147 75 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 MIR1289-2-201ENST00000408360 111 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC009310.1-201ENST00000414414 451 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AL358453.1-201ENST00000422522 250 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC241584.1-201ENST00000438469 1241 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 RPL23AP23-201ENST00000452590 471 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 snoU13.26-201ENST00000459452 105 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 RPS27AP10-201ENST00000496103 208 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 CKS1BP2-201ENST00000497342 240 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 MTCYBP35-201ENST00000503630 1137 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC034114.1-201ENST00000520293 285 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 NACAP3-201ENST00000552100 481 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC104763.2-201ENST00000604179 382 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 AC136601.2-201ENST00000604356 474 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 MIR3199-2-201ENST00000636243 86 ntBASIC1.11□□□□□ -2.23
HIST1H1AQ02539 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 RPL23AP29-201ENST00000397284 453 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 SNRPEP2-201ENST00000397592 279 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AL354695.1-201ENST00000427935 228 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AC007677.1-201ENST00000445757 515 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 HMGN2P10-201ENST00000448085 265 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.1□□□□□ -2.23
HIST1H1AQ02539 HMGN2P23-201ENST00000456759 269 ntBASIC1.1□□□□□ -2.23
HIST1H1AQ02539 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms