Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 AL031183.1-201ENST00000457667 207 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 CABYRP1-201ENST00000465493 1045 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 RNU6-928P-201ENST00000516876 104 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 MTND2P26-201ENST00000528255 1029 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.58□□□□□ -2.32
PRKDCP78527 AL391834.1-201ENST00000609609 560 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.58□□□□□ -2.32
PRKDCP78527 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.58□□□□□ -2.32
PRKDCP78527 MTND4P27-201ENST00000450813 1354 ntBASIC0.58□□□□□ -2.32
PRKDCP78527 MIR144-201ENST00000384886 86 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 MIR320B1-201ENST00000390209 79 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 FTH1P15-201ENST00000406984 280 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 MIR1912-201ENST00000410389 80 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 Z80107.1-201ENST00000436830 412 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 RPL30P11-201ENST00000495304 339 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.57□□□□□ -2.32
PRKDCP78527 SCARNA1-201ENST00000517138 166 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC013244.2-201ENST00000603396 103 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC025588.4-201ENST00000615802 908 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 Y_RNA.48-201ENST00000362710 103 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 Y_RNA.136-201ENST00000363444 102 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 RPL7L1P10-201ENST00000427790 463 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.57□□□□□ -2.32
PRKDCP78527 RNU4-77P-201ENST00000516692 156 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.57□□□□□ -2.32
PRKDCP78527 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.57□□□□□ -2.32
PRKDCP78527 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
PRKDCP78527 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.57□□□□□ -2.32
PRKDCP78527 SNORA31.8-201ENST00000516327 108 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 RNA5SP285-201ENST00000516619 119 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.57□□□□□ -2.32
PRKDCP78527 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.57□□□□□ -2.32
PRKDCP78527 AC146944.4-201ENST00000602697 718 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC010809.3-201ENST00000621310 641 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.57□□□□□ -2.32
PRKDCP78527 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.57□□□□□ -2.32
PRKDCP78527 RNU6-418P-201ENST00000384035 107 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 MIR767-201ENST00000390228 109 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AL512604.1-201ENST00000404812 257 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 RNU2-41P-201ENST00000410991 178 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.57□□□□□ -2.32
PRKDCP78527 RNU1-98P-201ENST00000458992 160 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC027575.1-201ENST00000481064 460 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 SNORA31.25-201ENST00000517242 134 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.57□□□□□ -2.32
PRKDCP78527 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.57□□□□□ -2.32
PRKDCP78527 RNU6-173P-201ENST00000364215 104 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.56□□□□□ -2.32
PRKDCP78527 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.56□□□□□ -2.32
PRKDCP78527 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.56□□□□□ -2.32
PRKDCP78527 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.56□□□□□ -2.32
PRKDCP78527 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.56□□□□□ -2.32
PRKDCP78527 AC104692.1-201ENST00000472406 90 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.56□□□□□ -2.32
PRKDCP78527 RNU6-351P-201ENST00000516097 100 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AC084373.1-201ENST00000603311 235 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AC006963.1-201ENST00000624003 1052 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 RNY4P3-201ENST00000365254 95 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 MIR627-201ENST00000384979 97 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 TRAPPC2P4-201ENST00000421750 331 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.56□□□□□ -2.32
PRKDCP78527 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.56□□□□□ -2.32
PRKDCP78527 AC121161.1-201ENST00000510606 652 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.56□□□□□ -2.32
PRKDCP78527 OR5B19P-201ENST00000531766 928 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.56□□□□□ -2.32
PRKDCP78527 MIR3616-201ENST00000584070 92 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AP001486.3-201ENST00000615334 372 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AC068787.1-201ENST00000623908 691 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
PRKDCP78527 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PRKDCP78527 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
PRKDCP78527 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
PRKDCP78527 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.56□□□□□ -2.32
PRKDCP78527 AC079780.1-201ENST00000428259 207 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 RPS29P28-201ENST00000446439 141 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 RPL23AP6-201ENST00000446637 472 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC0.56□□□□□ -2.32
PRKDCP78527 AC098591.2-201ENST00000510152 315 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AL161629.2-201ENST00000615347 275 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 AC068880.5-201ENST00000624331 290 ntBASIC0.56□□□□□ -2.32
PRKDCP78527 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
PRKDCP78527 AL356432.1-201ENST00000405809 419 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 RPL21P24-201ENST00000413752 448 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 HMGN1P10-201ENST00000474557 553 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
PRKDCP78527 RPL30P5-201ENST00000494923 336 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.55□□□□□ -2.32
PRKDCP78527 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC0.55□□□□□ -2.32
PRKDCP78527 AC133485.1-201ENST00000567176 124 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 AC138907.6-201ENST00000568401 126 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
PRKDCP78527 AL022578.1-201ENST00000439330 1433 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 AC087359.1-201ENST00000508335 1740 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 U3.29-201ENST00000391296 212 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 XKRYP1-201ENST00000423438 492 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 XKRYP2-201ENST00000432915 492 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.55□□□□□ -2.32
PRKDCP78527 AC093510.2-201ENST00000562820 896 ntBASIC0.55□□□□□ -2.32
PRKDCP78527 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms