Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 Y_RNA.364-201ENST00000365532 101 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 RNU6-356P-201ENST00000384140 107 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 MIR153-1-201ENST00000384914 90 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 RNU6-278P-201ENST00000390945 109 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AL590704.1-201ENST00000402856 794 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 RNU6-954P-201ENST00000411355 107 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXG1P55316 USP9YP7-201ENST00000436723 430 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 NOTCH2P1-201ENST00000443481 624 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXG1P55316 MTND1P17-201ENST00000448961 204 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 USP9YP32-201ENST00000452432 430 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 SNORA84-201ENST00000459229 133 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 SNORA25.10-201ENST00000515926 124 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 RNU2-10P-201ENST00000516375 211 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXG1P55316 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.33□□□□□ -1.88
FOXG1P55316 BNIP3P16-201ENST00000589779 534 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXG1P55316 SNORA62.6-201ENST00000606322 83 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AC006157.1-201ENST00000611750 366 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXG1P55316 AC005344.1-201ENST00000613391 459 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 HMGB1P24-202ENST00000615653 685 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 MIR4727-201ENST00000622232 55 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 AC092608.2-201ENST00000624427 218 ntBASIC3.33□□□□□ -1.88
FOXG1P55316 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.33□□□□□ -1.88
FOXG1P55316 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXG1P55316 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXG1P55316 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXG1P55316 AL138713.1-201ENST00000624026 2130 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC121333.1-201ENST00000567488 2709 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXG1P55316 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
FOXG1P55316 RNU6-179P-201ENST00000363350 107 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 Y_RNA.135-201ENST00000363439 95 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 Y_RNA.212-201ENST00000364177 102 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RNU6-188P-201ENST00000364207 107 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 SNORD115-7-201ENST00000365306 82 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 SNORD116-11-201ENST00000383882 92 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RNU6-890P-201ENST00000384121 107 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 Y_RNA.473-201ENST00000384333 102 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 MIR554-201ENST00000384874 96 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AL138878.1-201ENST00000405131 347 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RNU2-36P-201ENST00000410361 191 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RNA5SP39-201ENST00000411245 120 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 POLHP1-201ENST00000411806 470 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RAB9AP3-201ENST00000412737 573 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.32□□□□□ -1.88
FOXG1P55316 AL669831.1-202ENST00000428504 417 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXG1P55316 AL591212.2-201ENST00000433923 257 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AF228730.2-201ENST00000438784 848 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RAB9AP1-201ENST00000449393 573 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.32□□□□□ -1.88
FOXG1P55316 SUMO1P2-201ENST00000452524 304 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC108059.3-201ENST00000456388 214 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXG1P55316 RPL9P32-201ENST00000464118 620 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RPL21P93-201ENST00000480465 489 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXG1P55316 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXG1P55316 RNU6-635P-201ENST00000516651 102 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXG1P55316 AL137161.1-201ENST00000532231 390 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXG1P55316 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXG1P55316 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 MTCO3P23-201ENST00000561363 289 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXG1P55316 COX6CP3-201ENST00000580869 223 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC024619.4-201ENST00000580924 316 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.32□□□□□ -1.88
FOXG1P55316 AL355812.1-201ENST00000603215 216 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 FAM157A-202ENST00000615155 405 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC133104.2-201ENST00000615272 193 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AL355365.1-201ENST00000616480 294 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 AC025034.2-201ENST00000623264 286 ntBASIC3.32□□□□□ -1.88
FOXG1P55316 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXG1P55316 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.32□□□□□ -1.88
FOXG1P55316 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.32□□□□□ -1.88
FOXG1P55316 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms