Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
PTPN5P54829 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PTPN5P54829 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN5P54829 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN5P54829 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PTPN5P54829 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN5P54829 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN5P54829 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN5P54829 AC239868.2-201ENST00000564237 4527 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN5P54829 MIR412-201ENST00000362142 91 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 Y_RNA.33-201ENST00000362591 102 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RNU6-942P-201ENST00000363002 107 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RNU6-336P-201ENST00000364891 107 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 SNORA8.3-201ENST00000384679 139 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RNU6-159P-201ENST00000391080 106 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RPS3AP1-201ENST00000413190 320 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN5P54829 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN5P54829 HMGN2P32-201ENST00000444648 269 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 EEF1A1P1-201ENST00000447052 739 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RPS27P1-201ENST00000450552 247 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 AC010265.1-201ENST00000513509 211 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 RNU6-347P-201ENST00000516658 105 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 IGLVIV-53-201ENST00000520107 367 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN5P54829 HSPE1P4-201ENST00000550617 308 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 AL391903.3-201ENST00000612158 163 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
PTPN5P54829 AL360181.4-201ENST00000621752 134 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.68□□□□□ -1.5
PTPN5P54829 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.68□□□□□ -1.5
PTPN5P54829 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN5P54829 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.68□□□□□ -1.5
PTPN5P54829 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PTPN5P54829 INTS6P1-201ENST00000504674 2530 ntBASIC5.68□□□□□ -1.5
PTPN5P54829 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 IQCB2P-201ENST00000401788 1633 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PTPN5P54829 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 RNU6-801P-201ENST00000364087 105 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 Y_RNA.328-201ENST00000365208 113 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 MIR488-201ENST00000365739 83 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 RNU6-1286P-201ENST00000383871 107 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 MIR548A1-201ENST00000385041 97 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 MIR15B-201ENST00000385045 98 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 Y_RNA.617-201ENST00000410920 90 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 RAB9AP3-201ENST00000412737 573 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.67□□□□□ -1.5
PTPN5P54829 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN5P54829 CYCSP32-201ENST00000440548 321 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 RAB9AP1-201ENST00000449393 573 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 RN7SL354P-201ENST00000469282 294 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 RNU6-1061P-201ENST00000516530 99 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 RNU6-1007P-201ENST00000516586 107 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.67□□□□□ -1.5
PTPN5P54829 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN5P54829 MIR4311-201ENST00000580794 100 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.67□□□□□ -1.5
PTPN5P54829 AL590392.1-201ENST00000604960 446 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 AL442128.1-201ENST00000615151 90 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 AC013791.1-201ENST00000616619 62 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 AC074101.1-201ENST00000637861 241 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
PTPN5P54829 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
PTPN5P54829 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 AC133552.1-201ENST00000569988 4007 ntBASIC5.67□□□□□ -1.5
PTPN5P54829 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.67□□□□□ -1.5
PTPN5P54829 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PTPN5P54829 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN5P54829 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PTPN5P54829 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PTPN5P54829 RN7SKP104-201ENST00000362605 328 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 RNA5SP123-201ENST00000363244 119 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 RNU6-137P-201ENST00000363680 108 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 U3.10-201ENST00000364459 214 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 RNA5SP30-201ENST00000365552 115 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 SNORA20B-201ENST00000384220 132 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 RNU6-729P-201ENST00000384399 107 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 MIR135A2-201ENST00000384854 100 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 MIR301A-201ENST00000385261 86 ntBASIC5.66□□□□□ -1.5
PTPN5P54829 AL133388.1-201ENST00000404509 287 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms