Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDX1P52945 RNY1P12-201ENST00000364251 105 ntBASIC2.97□□□□□ -1.93
PDX1P52945 SNORA71.1-201ENST00000364523 117 ntBASIC2.97□□□□□ -1.93
PDX1P52945 Y_RNA.367-201ENST00000365544 101 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RNU6-805P-201ENST00000365643 106 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RNU5A-6P-201ENST00000384136 116 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RNU6-1042P-201ENST00000384204 107 ntBASIC2.97□□□□□ -1.93
PDX1P52945 SNORD67-201ENST00000390833 111 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RNU2-33P-201ENST00000410344 192 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.97□□□□□ -1.93
PDX1P52945 SDCBPP3-201ENST00000419629 891 ntBASIC2.97□□□□□ -1.93
PDX1P52945 MED13P1-201ENST00000428342 171 ntBASIC2.97□□□□□ -1.93
PDX1P52945 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.97□□□□□ -1.93
PDX1P52945 PIGFP3-201ENST00000441918 722 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AC125238.1-201ENST00000448842 249 ntBASIC2.97□□□□□ -1.93
PDX1P52945 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.97□□□□□ -1.93
PDX1P52945 KC877373.1-201ENST00000479066 408 ntBASIC2.97□□□□□ -1.93
PDX1P52945 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.97□□□□□ -1.93
PDX1P52945 AC007182.2-201ENST00000489251 402 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AC092185.1-201ENST00000491371 97 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RPL30P5-201ENST00000494923 336 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RNA5SP356-201ENST00000515972 94 ntBASIC2.97□□□□□ -1.93
PDX1P52945 RNU6-927P-201ENST00000516199 100 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.97□□□□□ -1.93
PDX1P52945 AP003072.2-201ENST00000527756 676 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.97□□□□□ -1.93
PDX1P52945 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.97□□□□□ -1.93
PDX1P52945 RPS3AP4-201ENST00000555161 764 ntBASIC2.97□□□□□ -1.93
PDX1P52945 SUB1P2-201ENST00000556401 297 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.6-201ENST00000603753 252 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL391646.1-201ENST00000603860 190 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.11-201ENST00000604059 253 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AC008162.1-201ENST00000604718 254 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.1-201ENST00000604752 252 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.5-201ENST00000605253 252 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.12-201ENST00000605291 253 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.8-201ENST00000605353 252 ntBASIC2.97□□□□□ -1.93
PDX1P52945 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.97□□□□□ -1.93
PDX1P52945 AL670379.7-201ENST00000605823 252 ntBASIC2.97□□□□□ -1.93
PDX1P52945 AC087241.4-201ENST00000612441 480 ntBASIC2.97□□□□□ -1.93
PDX1P52945 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.97□□□□□ -1.93
PDX1P52945 AC098679.4-201ENST00000624241 654 ntBASIC2.97□□□□□ -1.93
PDX1P52945 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.97□□□□□ -1.93
PDX1P52945 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PDX1P52945 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDX1P52945 AC007785.2-201ENST00000598627 1916 ntBASIC2.97□□□□□ -1.93
PDX1P52945 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.96□□□□□ -1.93
PDX1P52945 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDX1P52945 Y_RNA.3-201ENST00000362331 103 ntBASIC2.96□□□□□ -1.94
PDX1P52945 Y_RNA.159-201ENST00000363674 87 ntBASIC2.96□□□□□ -1.94
PDX1P52945 Y_RNA.296-201ENST00000364930 108 ntBASIC2.96□□□□□ -1.94
PDX1P52945 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PDX1P52945 RNU6-741P-201ENST00000383889 107 ntBASIC2.96□□□□□ -1.94
PDX1P52945 RNU6-641P-201ENST00000384006 107 ntBASIC2.96□□□□□ -1.94
PDX1P52945 MIR1-2-201ENST00000384961 85 ntBASIC2.96□□□□□ -1.94
PDX1P52945 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDX1P52945 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.96□□□□□ -1.94
PDX1P52945 RPL32P35-201ENST00000415214 394 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AC092809.3-201ENST00000415453 231 ntBASIC2.96□□□□□ -1.94
PDX1P52945 BTF3L4P3-201ENST00000418879 476 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.96□□□□□ -1.94
PDX1P52945 GPR143P-201ENST00000434155 205 ntBASIC2.96□□□□□ -1.94
PDX1P52945 RPL23AP22-201ENST00000437556 453 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.96□□□□□ -1.94
PDX1P52945 AL135938.1-201ENST00000443141 297 ntBASIC2.96□□□□□ -1.94
PDX1P52945 NEFMP1-201ENST00000443423 1006 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.96□□□□□ -1.94
PDX1P52945 AC132479.1-201ENST00000449160 144 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.96□□□□□ -1.94
PDX1P52945 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.96□□□□□ -1.94
PDX1P52945 RNU6-720P-201ENST00000516363 108 ntBASIC2.96□□□□□ -1.94
PDX1P52945 RNA5SP380-201ENST00000517190 98 ntBASIC2.96□□□□□ -1.94
PDX1P52945 OR5B19P-201ENST00000531766 928 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.96□□□□□ -1.94
PDX1P52945 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.96□□□□□ -1.94
PDX1P52945 AC245505.1-201ENST00000556398 224 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.96□□□□□ -1.94
PDX1P52945 AL591516.1-201ENST00000611326 274 ntBASIC2.96□□□□□ -1.94
PDX1P52945 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PDX1P52945 PLCE1P1-201ENST00000622094 305 ntBASIC2.96□□□□□ -1.94
PDX1P52945 AC027309.3-201ENST00000623419 351 ntBASIC2.96□□□□□ -1.94
PDX1P52945 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.96□□□□□ -1.94
PDX1P52945 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.96□□□□□ -1.94
PDX1P52945 OR5AK4P-201ENST00000635912 903 ntBASIC2.96□□□□□ -1.94
PDX1P52945 MTND1P37-201ENST00000636562 264 ntBASIC2.96□□□□□ -1.94
PDX1P52945 OR5H6-203ENST00000642105 978 ntBASIC2.96□□□□□ -1.94
PDX1P52945 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
PDX1P52945 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDX1P52945 RNU6-960P-201ENST00000364056 120 ntBASIC2.95□□□□□ -1.94
PDX1P52945 RNU6-108P-201ENST00000365558 107 ntBASIC2.95□□□□□ -1.94
PDX1P52945 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.95□□□□□ -1.94
PDX1P52945 RNU6-946P-201ENST00000383878 107 ntBASIC2.95□□□□□ -1.94
PDX1P52945 RNU6-74P-201ENST00000384235 107 ntBASIC2.95□□□□□ -1.94
PDX1P52945 RNU6-456P-201ENST00000384493 107 ntBASIC2.95□□□□□ -1.94
PDX1P52945 RPS4XP3-201ENST00000398541 413 ntBASIC2.95□□□□□ -1.94
PDX1P52945 GSTA9P-201ENST00000406231 611 ntBASIC2.95□□□□□ -1.94
PDX1P52945 EEF1A1P41-201ENST00000414667 207 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AC012498.1-201ENST00000424037 437 ntBASIC2.95□□□□□ -1.94
PDX1P52945 AL590383.1-201ENST00000428602 75 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms