Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN3P51790 RNA5SP295-201ENST00000362655 121 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RNU1-39P-201ENST00000383897 165 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 Y_RNA.390-201ENST00000383932 102 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 BTF3P7-201ENST00000407097 488 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RN7SKP140-201ENST00000411196 284 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC127391.1-201ENST00000411737 98 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 ELOCP4-201ENST00000420090 333 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RPS15AP6-201ENST00000420703 385 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.34□□□□□ -1.87
CLCN3P51790 MTCO2P11-201ENST00000431069 680 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC104850.1-201ENST00000435940 476 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 NDUFB4P6-201ENST00000436819 366 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL451074.3-201ENST00000437709 472 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RPS12P18-201ENST00000442381 270 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCN3P51790 C1DP4-201ENST00000455429 424 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 SNORA59A-201ENST00000459326 152 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RPS20P22-201ENST00000473700 357 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCN3P51790 AL049874.1-201ENST00000489560 388 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC097462.2-201ENST00000504623 481 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 AC114797.1-201ENST00000514003 728 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 RNU6-314P-201ENST00000516574 104 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC104027.1-201ENST00000521887 300 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AK6P1-201ENST00000540219 478 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.34□□□□□ -1.87
CLCN3P51790 AC005951.2-201ENST00000576282 495 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 MIR5047-201ENST00000579212 100 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.34□□□□□ -1.87
CLCN3P51790 AC017083.3-201ENST00000609955 700 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AL133173.2-201ENST00000614270 90 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 MIR6863-201ENST00000636112 90 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 AP001148.1-201ENST00000624124 2359 ntBASIC3.34□□□□□ -1.87
CLCN3P51790 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CLCN3P51790 AC004520.1-201ENST00000608362 1413 ntBASIC3.34□□□□□ -1.88
CLCN3P51790 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
CLCN3P51790 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CLCN3P51790 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 OR4G2P-202ENST00000641004 1759 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCN3P51790 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
CLCN3P51790 RNU1-75P-201ENST00000347264 129 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RNY4P14-201ENST00000363656 96 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 Y_RNA.296-201ENST00000364930 108 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RNU5E-6P-201ENST00000365574 115 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 SNORA20.2-201ENST00000383922 131 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 MIR493-201ENST00000385254 89 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RNU6-328P-201ENST00000390887 106 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 EEF1A1P41-201ENST00000414667 207 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCN3P51790 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCN3P51790 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 ISCA1P6-201ENST00000427740 390 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 TAAR7P-201ENST00000436141 242 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 AC107083.1-201ENST00000439643 279 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RN7SL330P-201ENST00000469709 307 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 AL049830.2-201ENST00000480072 201 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RN7SL432P-201ENST00000484057 298 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RPL30P5-201ENST00000494923 336 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.33□□□□□ -1.88
CLCN3P51790 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.33□□□□□ -1.88
CLCN3P51790 RNU6-390P-201ENST00000516259 103 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RNU7-51P-201ENST00000516560 62 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 RN7SKP258-201ENST00000517151 304 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 AC022616.3-201ENST00000523940 148 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 ATP5F1P5-201ENST00000526403 760 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 FAM92A1P1-201ENST00000528023 890 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 MIR3167-201ENST00000579623 85 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 AC103710.3-201ENST00000608157 948 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 AL136164.4-201ENST00000625013 2135 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 SCARNA15.3-201ENST00000626315 122 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 SCARNA4.1-201ENST00000628597 123 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCN3P51790 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCN3P51790 CUL1P1-201ENST00000509510 2425 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CLCN3P51790 CR848007.1-201ENST00000442354 1699 ntBASIC3.33□□□□□ -1.88
CLCN3P51790 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCN3P51790 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCN3P51790 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CLCN3P51790 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCN3P51790 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCN3P51790 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CLCN3P51790 SNORD56.2-201ENST00000363242 71 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 Y_RNA.159-201ENST00000363674 87 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RNU6-960P-201ENST00000364056 120 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RNU6-282P-201ENST00000365357 103 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RNU6-780P-201ENST00000391030 104 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 SNORD115-47-201ENST00000391226 86 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RNU4-55P-201ENST00000410731 137 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 USP9YP6-201ENST00000413550 854 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms