Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CENPAP49450 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CENPAP49450 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CENPAP49450 AC004520.1-201ENST00000608362 1413 ntBASIC3.27□□□□□ -1.89
CENPAP49450 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CENPAP49450 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CENPAP49450 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.27□□□□□ -1.89
CENPAP49450 RNU6-512P-201ENST00000364438 103 ntBASIC3.27□□□□□ -1.89
CENPAP49450 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CENPAP49450 RNU6-116P-201ENST00000384042 109 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RNU6-1197P-201ENST00000391183 107 ntBASIC3.27□□□□□ -1.89
CENPAP49450 CISD1P1-201ENST00000393907 327 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RNU2-29P-201ENST00000410423 189 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RNU6-1068P-201ENST00000410958 103 ntBASIC3.27□□□□□ -1.89
CENPAP49450 NDUFB4P5-201ENST00000415445 361 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RPL7P10-201ENST00000417407 739 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 AL109913.1-201ENST00000421173 514 ntBASIC3.27□□□□□ -1.89
CENPAP49450 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.27□□□□□ -1.89
CENPAP49450 AL591419.1-201ENST00000427423 339 ntBASIC3.27□□□□□ -1.89
CENPAP49450 CALM2P2-201ENST00000428512 440 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.27□□□□□ -1.89
CENPAP49450 AC092573.2-201ENST00000434546 243 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RPS29P7-201ENST00000439662 171 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 PIGFP3-201ENST00000441918 722 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RPS29P31-201ENST00000446147 164 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 AC087588.1-201ENST00000462203 316 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RPS20P22-201ENST00000473700 357 ntBASIC3.27□□□□□ -1.89
CENPAP49450 RN7SKP219-201ENST00000516825 296 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 ATP5F1P5-201ENST00000526403 760 ntBASIC3.27□□□□□ -1.89
CENPAP49450 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.27□□□□□ -1.89
CENPAP49450 MIR4425-201ENST00000580572 84 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.27□□□□□ -1.89
CENPAP49450 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.27□□□□□ -1.89
CENPAP49450 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.27□□□□□ -1.89
CENPAP49450 uc_338.11-201ENST00000619132 160 ntBASIC3.27□□□□□ -1.89
CENPAP49450 AL354798.1-201ENST00000622505 329 ntBASIC3.27□□□□□ -1.89
CENPAP49450 MIR3662-201ENST00000637030 95 ntBASIC3.27□□□□□ -1.89
CENPAP49450 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CENPAP49450 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.27□□□□□ -1.89
CENPAP49450 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CENPAP49450 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
CENPAP49450 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CENPAP49450 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CENPAP49450 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CENPAP49450 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CENPAP49450 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
CENPAP49450 RNU6-552P-201ENST00000362869 119 ntBASIC3.26□□□□□ -1.89
CENPAP49450 RNU6-1167P-201ENST00000363227 94 ntBASIC3.26□□□□□ -1.89
CENPAP49450 RNY3P3-201ENST00000363816 102 ntBASIC3.26□□□□□ -1.89
CENPAP49450 RNU6-1283P-201ENST00000365314 105 ntBASIC3.26□□□□□ -1.89
CENPAP49450 RNU6-903P-201ENST00000391270 109 ntBASIC3.26□□□□□ -1.89
CENPAP49450 U3.39-201ENST00000408569 239 ntBASIC3.26□□□□□ -1.89
CENPAP49450 Z85995.1-201ENST00000415547 335 ntBASIC3.26□□□□□ -1.89
CENPAP49450 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.26□□□□□ -1.89
CENPAP49450 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 AL451062.2-201ENST00000427515 271 ntBASIC3.26□□□□□ -1.89
CENPAP49450 AC004975.1-201ENST00000428733 208 ntBASIC3.26□□□□□ -1.89
CENPAP49450 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.26□□□□□ -1.89
CENPAP49450 TAAR7P-201ENST00000436141 242 ntBASIC3.26□□□□□ -1.89
CENPAP49450 DPPA3P1-201ENST00000448050 469 ntBASIC3.26□□□□□ -1.89
CENPAP49450 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 AL118520.1-201ENST00000450770 291 ntBASIC3.26□□□□□ -1.89
CENPAP49450 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 ELOCP23-201ENST00000452014 332 ntBASIC3.26□□□□□ -1.89
CENPAP49450 NUTF2P7-201ENST00000453086 375 ntBASIC3.26□□□□□ -1.89
CENPAP49450 SNRPFP3-201ENST00000457792 225 ntBASIC3.26□□□□□ -1.89
CENPAP49450 KC877373.1-201ENST00000479066 408 ntBASIC3.26□□□□□ -1.89
CENPAP49450 PRDX4P1-201ENST00000507189 574 ntBASIC3.26□□□□□ -1.89
CENPAP49450 RNU6-143P-201ENST00000516942 93 ntBASIC3.26□□□□□ -1.89
CENPAP49450 RNA5SP471-201ENST00000516971 106 ntBASIC3.26□□□□□ -1.89
CENPAP49450 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.26□□□□□ -1.89
CENPAP49450 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.26□□□□□ -1.89
CENPAP49450 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.26□□□□□ -1.89
CENPAP49450 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 AC007224.1-201ENST00000564410 144 ntBASIC3.26□□□□□ -1.89
CENPAP49450 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
CENPAP49450 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.26□□□□□ -1.89
CENPAP49450 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.26□□□□□ -1.89
CENPAP49450 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.26□□□□□ -1.89
CENPAP49450 AC107294.1-201ENST00000609524 467 ntBASIC3.26□□□□□ -1.89
CENPAP49450 DISC2.1-201ENST00000612827 205 ntBASIC3.26□□□□□ -1.89
CENPAP49450 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.26□□□□□ -1.89
CENPAP49450 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.26□□□□□ -1.89
CENPAP49450 MFSD8-233ENST00000641482 4860 ntBASIC3.26□□□□□ -1.89
CENPAP49450 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CENPAP49450 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CENPAP49450 AC007656.2-201ENST00000624902 4547 ntBASIC3.25□□□□□ -1.89
CENPAP49450 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CENPAP49450 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms