Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.22□□□□□ -2.05
RFX3P48380 RNU1-52P-201ENST00000384190 164 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX3P48380 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX3P48380 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.22□□□□□ -2.05
RFX3P48380 MTND1P28-201ENST00000435623 950 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC020550.1-201ENST00000447385 163 ntBASIC2.22□□□□□ -2.05
RFX3P48380 RPS3P1-201ENST00000456781 192 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX3P48380 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
RFX3P48380 LTV1P1-201ENST00000510683 1237 ntBASIC2.22□□□□□ -2.05
RFX3P48380 MTND5P13-201ENST00000513046 1079 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC022447.1-201ENST00000515358 464 ntBASIC2.22□□□□□ -2.05
RFX3P48380 RNU6-927P-201ENST00000516199 100 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX3P48380 AP001646.1-201ENST00000527936 915 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.22□□□□□ -2.05
RFX3P48380 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX3P48380 AL133153.1-201ENST00000557756 303 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC009097.3-201ENST00000563557 1018 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.22□□□□□ -2.05
RFX3P48380 AC008121.1-201ENST00000603244 268 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AL645944.1-201ENST00000603857 493 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC092953.2-201ENST00000608000 699 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AL356596.1-201ENST00000624230 379 ntBASIC2.22□□□□□ -2.05
RFX3P48380 IGHVIII-44-202ENST00000636235 289 ntBASIC2.22□□□□□ -2.05
RFX3P48380 AC110491.1-201ENST00000562191 2010 ntBASIC2.22□□□□□ -2.05
RFX3P48380 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.21□□□□□ -2.06
RFX3P48380 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
RFX3P48380 RNY4P24-201ENST00000362735 96 ntBASIC2.21□□□□□ -2.06
RFX3P48380 Y_RNA.245-201ENST00000364493 95 ntBASIC2.21□□□□□ -2.06
RFX3P48380 RNA5SP88-201ENST00000365560 109 ntBASIC2.21□□□□□ -2.06
RFX3P48380 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.21□□□□□ -2.06
RFX3P48380 RNU1-73P-201ENST00000383971 164 ntBASIC2.21□□□□□ -2.06
RFX3P48380 MIR19A-201ENST00000384878 82 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AL359511.1-201ENST00000402970 211 ntBASIC2.21□□□□□ -2.06
RFX3P48380 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.21□□□□□ -2.06
RFX3P48380 SSR1P2-201ENST00000415208 787 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC096649.2-201ENST00000416186 393 ntBASIC2.21□□□□□ -2.06
RFX3P48380 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX3P48380 UBE2FP3-201ENST00000436366 524 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX3P48380 AC098831.1-201ENST00000440661 216 ntBASIC2.21□□□□□ -2.06
RFX3P48380 RPL32P28-201ENST00000443577 397 ntBASIC2.21□□□□□ -2.06
RFX3P48380 RPL7P36-201ENST00000444633 681 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX3P48380 ELOCP30-201ENST00000447108 299 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX3P48380 SNORD11.1-201ENST00000459482 85 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC104685.1-201ENST00000502445 371 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.21□□□□□ -2.06
RFX3P48380 AC234781.5-201ENST00000508429 271 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX3P48380 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.21□□□□□ -2.06
RFX3P48380 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX3P48380 AC093012.1-202ENST00000549403 582 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC005261.5-201ENST00000596280 355 ntBASIC2.21□□□□□ -2.06
RFX3P48380 DPPA3P3-201ENST00000603842 430 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AL450336.1-201ENST00000605180 586 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC097468.3-201ENST00000607956 456 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC007038.2-201ENST00000608095 740 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC103710.1-201ENST00000610003 901 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AC010329.5-201ENST00000623497 2174 ntBASIC2.21□□□□□ -2.06
RFX3P48380 AL078595.3-201ENST00000623815 1166 ntBASIC2.21□□□□□ -2.06
RFX3P48380 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RFX3P48380 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.21□□□□□ -2.06
RFX3P48380 AC097655.1-201ENST00000635075 318 ntBASIC2.21□□□□□ -2.06
RFX3P48380 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
RFX3P48380 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RFX3P48380 Z82209.1-201ENST00000422141 2135 ntBASIC2.21□□□□□ -2.06
RFX3P48380 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX3P48380 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX3P48380 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFX3P48380 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RFX3P48380 RNU4-82P-201ENST00000362443 140 ntBASIC2.2□□□□□ -2.06
RFX3P48380 RNA5SP126-201ENST00000365092 109 ntBASIC2.2□□□□□ -2.06
RFX3P48380 MIR513B-201ENST00000385136 84 ntBASIC2.2□□□□□ -2.06
RFX3P48380 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.2□□□□□ -2.06
RFX3P48380 NDUFS5P4-201ENST00000412983 318 ntBASIC2.2□□□□□ -2.06
RFX3P48380 RPL21P24-201ENST00000413752 448 ntBASIC2.2□□□□□ -2.06
RFX3P48380 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
RFX3P48380 SEPT2P1-201ENST00000419651 180 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.2□□□□□ -2.06
RFX3P48380 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX3P48380 HMGB1P9-201ENST00000429856 646 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC244035.1-201ENST00000430042 390 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AL117351.1-201ENST00000438864 766 ntBASIC2.2□□□□□ -2.06
RFX3P48380 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.2□□□□□ -2.06
RFX3P48380 IFNA11P-201ENST00000446352 526 ntBASIC2.2□□□□□ -2.06
RFX3P48380 EEF1B2P7-201ENST00000451177 676 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.2□□□□□ -2.06
RFX3P48380 TRBV1-201ENST00000476502 284 ntBASIC2.2□□□□□ -2.06
RFX3P48380 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.2□□□□□ -2.06
RFX3P48380 RPL23AP41-201ENST00000484754 458 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC034244.1-201ENST00000507687 207 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC023141.11-201ENST00000508864 202 ntBASIC2.2□□□□□ -2.06
RFX3P48380 AC112673.1-201ENST00000513168 575 ntBASIC2.2□□□□□ -2.06
RFX3P48380 RNA5SP165-201ENST00000517142 115 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms