Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 RPS27P27-201ENST00000498779 255 ntBASIC2.3□□□□□ -2.04
RORAP35398 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.3□□□□□ -2.04
RORAP35398 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RORAP35398 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 MTND2P32-201ENST00000521584 1038 ntBASIC2.3□□□□□ -2.04
RORAP35398 AC007115.1-201ENST00000546853 234 ntBASIC2.3□□□□□ -2.04
RORAP35398 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.3□□□□□ -2.04
RORAP35398 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.3□□□□□ -2.04
RORAP35398 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 AC107952.2-201ENST00000606048 486 ntBASIC2.3□□□□□ -2.04
RORAP35398 FTX_3.1-201ENST00000610451 147 ntBASIC2.3□□□□□ -2.04
RORAP35398 AC025594.3-201ENST00000613068 790 ntBASIC2.3□□□□□ -2.04
RORAP35398 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 ZNF876P-202ENST00000398732 1485 ntBASIC2.3□□□□□ -2.04
RORAP35398 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
RORAP35398 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RORAP35398 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RORAP35398 MTND4P27-201ENST00000450813 1354 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RORAP35398 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
RORAP35398 RPL21P132-201ENST00000331267 462 ntBASIC2.29□□□□□ -2.04
RORAP35398 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
RORAP35398 AL162578.1-201ENST00000406202 378 ntBASIC2.29□□□□□ -2.04
RORAP35398 RNU6-920P-201ENST00000410926 92 ntBASIC2.29□□□□□ -2.04
RORAP35398 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.29□□□□□ -2.04
RORAP35398 LARP1BP3-201ENST00000437229 869 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC107626.1-201ENST00000471084 183 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC010631.1-201ENST00000474150 156 ntBASIC2.29□□□□□ -2.04
RORAP35398 RPS29P20-201ENST00000489592 171 ntBASIC2.29□□□□□ -2.04
RORAP35398 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RORAP35398 AC110760.3-202ENST00000515177 371 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC022447.1-201ENST00000515358 464 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.29□□□□□ -2.04
RORAP35398 PRELID2P1-201ENST00000552837 301 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.29□□□□□ -2.04
RORAP35398 AL645944.1-201ENST00000603857 493 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC013244.3-201ENST00000605614 388 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC087241.4-201ENST00000612441 480 ntBASIC2.29□□□□□ -2.04
RORAP35398 AC245884.12-201ENST00000615364 59 ntBASIC2.29□□□□□ -2.04
RORAP35398 AP000676.3-201ENST00000623299 569 ntBASIC2.29□□□□□ -2.04
RORAP35398 MIR1291-201ENST00000627649 87 ntBASIC2.29□□□□□ -2.04
RORAP35398 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.29□□□□□ -2.04
RORAP35398 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
RORAP35398 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
RORAP35398 AC006020.1-201ENST00000420179 1854 ntBASIC2.28□□□□□ -2.04
RORAP35398 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.28□□□□□ -2.04
RORAP35398 FAM133CP-201ENST00000332869 704 ntBASIC2.28□□□□□ -2.04
RORAP35398 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RORAP35398 SNORD113-6-201ENST00000363345 75 ntBASIC2.28□□□□□ -2.04
RORAP35398 SNORA41-201ENST00000384675 132 ntBASIC2.28□□□□□ -2.04
RORAP35398 CCNG1P1-201ENST00000406783 885 ntBASIC2.28□□□□□ -2.04
RORAP35398 RNU4-72P-201ENST00000410754 173 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC023141.4-201ENST00000412031 328 ntBASIC2.28□□□□□ -2.04
RORAP35398 AL008987.1-201ENST00000415528 237 ntBASIC2.28□□□□□ -2.04
RORAP35398 USP9YP26-201ENST00000421008 661 ntBASIC2.28□□□□□ -2.04
RORAP35398 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.28□□□□□ -2.04
RORAP35398 AC098826.1-201ENST00000433943 471 ntBASIC2.28□□□□□ -2.04
RORAP35398 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.28□□□□□ -2.04
RORAP35398 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 HIGD1AP2-201ENST00000446367 280 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC020550.1-201ENST00000447385 163 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RORAP35398 MRPS17P3-201ENST00000465453 385 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC055855.1-201ENST00000489563 579 ntBASIC2.28□□□□□ -2.04
RORAP35398 AL160314.1-201ENST00000490836 438 ntBASIC2.28□□□□□ -2.04
RORAP35398 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 AC020699.1-201ENST00000505161 445 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 AC107222.1-201ENST00000510899 637 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.28□□□□□ -2.04
RORAP35398 SCARNA17.1-201ENST00000516211 143 ntBASIC2.28□□□□□ -2.04
RORAP35398 RNU6-390P-201ENST00000516259 103 ntBASIC2.28□□□□□ -2.04
RORAP35398 SCARNA17.2-201ENST00000516334 143 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.28□□□□□ -2.04
RORAP35398 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 AGGF1P5-201ENST00000567900 919 ntBASIC2.28□□□□□ -2.04
RORAP35398 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
RORAP35398 MIR4293-201ENST00000584305 78 ntBASIC2.28□□□□□ -2.04
RORAP35398 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.28□□□□□ -2.04
RORAP35398 RPS15AP11-201ENST00000594193 385 ntBASIC2.28□□□□□ -2.04
RORAP35398 MTND4LP5-201ENST00000605152 292 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC072039.2-201ENST00000608883 439 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC004908.2-201ENST00000609090 574 ntBASIC2.28□□□□□ -2.04
RORAP35398 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.28□□□□□ -2.04
RORAP35398 SCARNA17.4-201ENST00000614296 143 ntBASIC2.28□□□□□ -2.04
RORAP35398 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
RORAP35398 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
RORAP35398 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RORAP35398 AC010329.5-201ENST00000623497 2174 ntBASIC2.27□□□□□ -2.05
RORAP35398 AC119751.3-201ENST00000399720 670 ntBASIC2.27□□□□□ -2.05
RORAP35398 MIR888-201ENST00000401186 77 ntBASIC2.27□□□□□ -2.05
RORAP35398 MIR1305-201ENST00000408300 86 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms