Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.34□□□□□ -2.03
SHMT2P34897 EEF1B2P7-201ENST00000451177 676 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 RPL12P25-201ENST00000455592 494 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC092798.1-201ENST00000458542 409 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC087588.1-201ENST00000462203 316 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 RPL23AP41-201ENST00000484754 458 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC010486.1-201ENST00000511793 424 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC112673.1-201ENST00000513168 575 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 DEFB108A-201ENST00000530110 222 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 ELOCP32-201ENST00000548625 324 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC078814.3-201ENST00000553036 491 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.34□□□□□ -2.03
SHMT2P34897 AC009094.1-201ENST00000564443 426 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC108747.1-201ENST00000609508 535 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 AC004852.3-201ENST00000614131 326 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.34□□□□□ -2.03
SHMT2P34897 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.34□□□□□ -2.03
SHMT2P34897 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SHMT2P34897 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SHMT2P34897 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SHMT2P34897 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SHMT2P34897 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.33□□□□□ -2.04
SHMT2P34897 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.33□□□□□ -2.04
SHMT2P34897 SNORA67.4-201ENST00000384688 142 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 SNORA80E-201ENST00000384744 137 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL139397.2-201ENST00000404529 772 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC009963.1-201ENST00000417265 157 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.33□□□□□ -2.04
SHMT2P34897 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.33□□□□□ -2.04
SHMT2P34897 AL591719.1-201ENST00000444669 744 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 GDI2P2-201ENST00000445131 608 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.33□□□□□ -2.04
SHMT2P34897 MTCO1P42-201ENST00000457379 726 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC013267.1-201ENST00000458227 267 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC072039.1-201ENST00000477611 581 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL160314.1-201ENST00000490836 438 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 RN7SL636P-201ENST00000497504 294 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 SUMO2P6-201ENST00000505273 288 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC107222.1-201ENST00000510899 637 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 RN7SKP287-201ENST00000516546 266 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 RN7SKP258-201ENST00000517151 304 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.33□□□□□ -2.04
SHMT2P34897 AC021269.2-201ENST00000532318 330 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.33□□□□□ -2.04
SHMT2P34897 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.33□□□□□ -2.04
SHMT2P34897 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.33□□□□□ -2.04
SHMT2P34897 AC093012.1-202ENST00000549403 582 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 PRELID2P1-201ENST00000552837 301 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.33□□□□□ -2.04
SHMT2P34897 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
SHMT2P34897 AC025281.1-201ENST00000567026 265 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL356432.3-201ENST00000568952 465 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 MIR4435-1-201ENST00000582552 80 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 HMGN2P15-201ENST00000585707 270 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AP000403.1-201ENST00000603349 851 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AC103810.6-201ENST00000606708 136 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL391813.2-201ENST00000609113 322 ntBASIC2.33□□□□□ -2.04
SHMT2P34897 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.33□□□□□ -2.04
SHMT2P34897 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SHMT2P34897 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.33□□□□□ -2.04
SHMT2P34897 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
SHMT2P34897 RNU6-500P-201ENST00000362349 107 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 RNY4P24-201ENST00000362735 96 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 SNORA67.1-201ENST00000364749 141 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 TAS2R15P-201ENST00000390674 928 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.32□□□□□ -2.04
SHMT2P34897 RPS27AP14-201ENST00000422868 454 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 TIMM9P1-201ENST00000436122 256 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SHMT2P34897 RBM43P1-201ENST00000476891 1081 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC114786.4-201ENST00000508771 728 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC114797.1-201ENST00000514003 728 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.32□□□□□ -2.04
SHMT2P34897 RNU6-1003P-201ENST00000517099 105 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 AP002770.2-201ENST00000543613 532 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC010546.1-201ENST00000569391 485 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.32□□□□□ -2.04
SHMT2P34897 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC093424.1-201ENST00000604999 338 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC239868.4-201ENST00000608318 671 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 OR10AB1P-201ENST00000609613 938 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms