Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXA9P31269 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA9P31269 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.35□□□□□ -2.03
HOXA9P31269 RNU6-1072P-201ENST00000384703 107 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 RNU6-443P-201ENST00000384780 107 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 MIR221-201ENST00000385135 110 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
HOXA9P31269 AL513475.1-201ENST00000406602 315 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 RPS3AP24-201ENST00000407896 734 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA9P31269 RN7SKP266-201ENST00000410232 287 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXA9P31269 AL591806.2-201ENST00000433122 173 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AC090774.1-201ENST00000435925 246 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 RPL26P6-201ENST00000440913 438 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.35□□□□□ -2.03
HOXA9P31269 AC021382.1-201ENST00000483523 359 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA9P31269 AC109464.2-201ENST00000510242 943 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AL359273.1-201ENST00000510918 627 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 RNU6-1129P-201ENST00000515964 104 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 SNORA3.4-201ENST00000515969 96 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 SNORA31.22-201ENST00000517204 135 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXA9P31269 CASP1P1-201ENST00000526345 212 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.35□□□□□ -2.03
HOXA9P31269 AC015712.3-201ENST00000559380 164 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 MIR4658-201ENST00000584344 65 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
HOXA9P31269 UBE2L4-201ENST00000587688 464 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 BCRP9-201ENST00000605312 388 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 BNIP3P10-201ENST00000605360 577 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AL031667.3-201ENST00000620124 655 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 MIR6132-201ENST00000622083 109 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 AL158801.5-201ENST00000623123 465 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.35□□□□□ -2.03
HOXA9P31269 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA9P31269 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
HOXA9P31269 AC092447.10-201ENST00000620607 1652 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXA9P31269 AL139276.1-201ENST00000311910 1001 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
HOXA9P31269 RNU6-97P-201ENST00000363387 104 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 SNORA38-201ENST00000363946 132 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 Y_RNA.302-201ENST00000364997 102 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 RNU6-114P-201ENST00000384704 105 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AL590084.2-201ENST00000401481 382 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXA9P31269 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA9P31269 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.34□□□□□ -2.03
HOXA9P31269 AC005005.2-201ENST00000420779 380 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXA9P31269 Z98742.2-201ENST00000431564 187 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.34□□□□□ -2.03
HOXA9P31269 MTND5P2-201ENST00000442927 1142 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA9P31269 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA9P31269 PAXBP1P1-201ENST00000449315 447 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AL139109.1-201ENST00000455491 297 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AL139824.2-201ENST00000458731 1095 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 RPL30P5-201ENST00000494923 336 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.34□□□□□ -2.03
HOXA9P31269 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA9P31269 RNA5SP216-201ENST00000516111 123 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.34□□□□□ -2.03
HOXA9P31269 GLYCAM1-201ENST00000546596 285 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 ISCA1P3-201ENST00000577104 373 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 MIR544B-201ENST00000582372 78 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 NRBF2P1-201ENST00000587407 859 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.34□□□□□ -2.03
HOXA9P31269 AC011451.2-201ENST00000604303 598 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AL158211.4-201ENST00000606988 584 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AC072039.2-201ENST00000608883 439 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AP000254.1-201ENST00000609934 520 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 MIR6895-201ENST00000613497 78 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 AC007671.2-201ENST00000637344 619 ntBASIC2.34□□□□□ -2.03
HOXA9P31269 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.34□□□□□ -2.04
HOXA9P31269 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.04
HOXA9P31269 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
HOXA9P31269 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
HOXA9P31269 ZNF355P-201ENST00000427301 3216 ntBASIC2.34□□□□□ -2.04
HOXA9P31269 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA9P31269 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HOXA9P31269 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 SNORA68.1-201ENST00000364537 132 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 RNU1-52P-201ENST00000384190 164 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 SNORA64-201ENST00000384674 134 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 MIR764-201ENST00000390811 85 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 RNU6-482P-201ENST00000391068 107 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 U3.37-201ENST00000408528 213 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 MIR1290-201ENST00000408735 78 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 MTCO1P17-201ENST00000411522 491 ntBASIC2.33□□□□□ -2.04
HOXA9P31269 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.33□□□□□ -2.04
HOXA9P31269 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HOXA9P31269 AL121871.1-201ENST00000443413 436 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms