Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNA5SP384-201ENST00000516615 116 ntBASIC5.18□□□□□ -1.58
RXRBP28702 SNORD116.3-201ENST00000517176 78 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AC069240.1-201ENST00000548774 375 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AL133153.1-201ENST00000557756 303 ntBASIC5.18□□□□□ -1.58
RXRBP28702 MIR5692C1-201ENST00000585309 91 ntBASIC5.18□□□□□ -1.58
RXRBP28702 ATP1B3P1-201ENST00000605365 821 ntBASIC5.18□□□□□ -1.58
RXRBP28702 AC141273.2-201ENST00000618989 130 ntBASIC5.18□□□□□ -1.58
RXRBP28702 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.18□□□□□ -1.58
RXRBP28702 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RXRBP28702 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RXRBP28702 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.18□□□□□ -1.58
RXRBP28702 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RXRBP28702 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RXRBP28702 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RXRBP28702 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RXRBP28702 MTND5P7-201ENST00000413558 1798 ntBASIC5.17□□□□□ -1.58
RXRBP28702 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RXRBP28702 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 RNU6-1287P-201ENST00000362914 107 ntBASIC5.17□□□□□ -1.58
RXRBP28702 SNORD35B-201ENST00000363660 87 ntBASIC5.17□□□□□ -1.58
RXRBP28702 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
RXRBP28702 Y_RNA.428-201ENST00000384078 102 ntBASIC5.17□□□□□ -1.58
RXRBP28702 RNU6-1060P-201ENST00000384664 107 ntBASIC5.17□□□□□ -1.58
RXRBP28702 RPL21P1-201ENST00000399532 476 ntBASIC5.17□□□□□ -1.58
RXRBP28702 RNU6-101P-201ENST00000410323 104 ntBASIC5.17□□□□□ -1.58
RXRBP28702 RNU6-603P-201ENST00000411403 107 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.17□□□□□ -1.58
RXRBP28702 BX842559.1-201ENST00000419615 532 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.17□□□□□ -1.58
RXRBP28702 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.17□□□□□ -1.58
RXRBP28702 DYNLT3P2-201ENST00000442517 295 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AL353691.1-201ENST00000451332 387 ntBASIC5.17□□□□□ -1.58
RXRBP28702 RNU7-59P-201ENST00000459101 61 ntBASIC5.17□□□□□ -1.58
RXRBP28702 RPL21P11-201ENST00000461458 483 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AC008571.1-201ENST00000467232 300 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AC022493.2-201ENST00000506122 481 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.17□□□□□ -1.58
RXRBP28702 RNU6-1069P-201ENST00000516612 133 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AC131281.1-201ENST00000522984 164 ntBASIC5.17□□□□□ -1.58
RXRBP28702 FAM60DP-201ENST00000524174 632 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AL121576.1-201ENST00000556055 276 ntBASIC5.17□□□□□ -1.58
RXRBP28702 MIR4293-201ENST00000584305 78 ntBASIC5.17□□□□□ -1.58
RXRBP28702 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 AL451007.1-201ENST00000595491 289 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AC004805.2-201ENST00000605382 482 ntBASIC5.17□□□□□ -1.58
RXRBP28702 MIR6864-201ENST00000617935 70 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.17□□□□□ -1.58
RXRBP28702 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RXRBP28702 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.17□□□□□ -1.58
RXRBP28702 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RXRBP28702 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.17□□□□□ -1.58
RXRBP28702 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.17□□□□□ -1.58
RXRBP28702 AC126323.6-202ENST00000568092 3511 ntBASIC5.17□□□□□ -1.58
RXRBP28702 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RXRBP28702 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 RNU4-44P-201ENST00000363050 141 ntBASIC5.16□□□□□ -1.58
RXRBP28702 RNA5SP399-201ENST00000364003 117 ntBASIC5.16□□□□□ -1.58
RXRBP28702 MT-TW-201ENST00000387382 68 ntBASIC5.16□□□□□ -1.58
RXRBP28702 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RXRBP28702 AC127537.2-201ENST00000439258 465 ntBASIC5.16□□□□□ -1.58
RXRBP28702 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.16□□□□□ -1.58
RXRBP28702 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.16□□□□□ -1.58
RXRBP28702 RNU6-1132P-201ENST00000459214 107 ntBASIC5.16□□□□□ -1.58
RXRBP28702 AC104472.2-201ENST00000469035 601 ntBASIC5.16□□□□□ -1.58
RXRBP28702 Vault.1-201ENST00000516474 102 ntBASIC5.16□□□□□ -1.58
RXRBP28702 SCARNA16.2-201ENST00000516520 172 ntBASIC5.16□□□□□ -1.58
RXRBP28702 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.16□□□□□ -1.58
RXRBP28702 RPL23AP87-202ENST00000573039 466 ntBASIC5.16□□□□□ -1.58
RXRBP28702 MIR4672-201ENST00000583126 81 ntBASIC5.16□□□□□ -1.58
RXRBP28702 BDH2P1-201ENST00000602288 736 ntBASIC5.16□□□□□ -1.58
RXRBP28702 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 ATP5A1P2-202ENST00000616464 443 ntBASIC5.16□□□□□ -1.58
RXRBP28702 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.16□□□□□ -1.58
RXRBP28702 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC5.16□□□□□ -1.58
RXRBP28702 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RXRBP28702 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RXRBP28702 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RXRBP28702 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RXRBP28702 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
RXRBP28702 ZNF734P-201ENST00000419494 1534 ntBASIC5.15□□□□□ -1.58
RXRBP28702 Y_RNA.288-201ENST00000364854 92 ntBASIC5.15□□□□□ -1.59
RXRBP28702 Y_RNA.350-201ENST00000365409 98 ntBASIC5.15□□□□□ -1.59
RXRBP28702 U3.19-201ENST00000390893 196 ntBASIC5.15□□□□□ -1.59
RXRBP28702 RNU6-278P-201ENST00000390945 109 ntBASIC5.15□□□□□ -1.59
RXRBP28702 RPL30P2-201ENST00000414021 291 ntBASIC5.15□□□□□ -1.59
RXRBP28702 MRPS18CP6-201ENST00000423587 223 ntBASIC5.15□□□□□ -1.59
RXRBP28702 RPS15AP10-201ENST00000432472 382 ntBASIC5.15□□□□□ -1.59
RXRBP28702 RPL21P112-201ENST00000434403 463 ntBASIC5.15□□□□□ -1.59
RXRBP28702 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RXRBP28702 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.15□□□□□ -1.59
RXRBP28702 SNORD5.1-201ENST00000458800 75 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms