Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 RNU6-1316P-201ENST00000384242 108 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 RNU6-1072P-201ENST00000384703 107 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 RNU6-443P-201ENST00000384780 107 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXD10P28358 HMGB1P49-201ENST00000418882 569 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 SEPT2P1-201ENST00000419651 180 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 MTND1P20-201ENST00000430341 950 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 THAP5P1-201ENST00000439089 262 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 MTND1P26-201ENST00000440488 538 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 CACYBPP2-201ENST00000453625 678 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.68□□□□□ -1.98
HOXD10P28358 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.68□□□□□ -1.98
HOXD10P28358 HMGB3P3-201ENST00000510526 400 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 SNORA31.11-201ENST00000516528 139 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD10P28358 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD10P28358 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD10P28358 AC087465.1-201ENST00000560574 245 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.68□□□□□ -1.98
HOXD10P28358 MIR4658-201ENST00000584344 65 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXD10P28358 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXD10P28358 AC004987.4-201ENST00000603383 338 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AL355877.2-201ENST00000603670 358 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AL158211.4-201ENST00000606988 584 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 MIR6130-201ENST00000619419 109 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AP000676.3-201ENST00000623299 569 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AP000770.2-201ENST00000623694 100 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AC007490.1-201ENST00000624321 703 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXD10P28358 MIR219B-201ENST00000637023 88 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AP003399.1-201ENST00000637534 361 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 AC103706.2-201ENST00000638080 240 ntBASIC2.68□□□□□ -1.98
HOXD10P28358 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXD10P28358 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HOXD10P28358 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HOXD10P28358 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.68□□□□□ -1.98
HOXD10P28358 AC022336.2-201ENST00000568966 2538 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 MTND4P16-201ENST00000466108 1367 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
HOXD10P28358 SNORA41-201ENST00000384675 132 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD10P28358 PPP1R11P2-201ENST00000423543 382 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 MTCO3P30-201ENST00000426425 670 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AL445669.1-201ENST00000426743 755 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 Z98742.2-201ENST00000431564 187 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD10P28358 RPL31P60-201ENST00000478450 367 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC024589.1-201ENST00000512207 263 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC105185.1-201ENST00000518705 535 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 ELOCP31-201ENST00000540463 467 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXD10P28358 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.67□□□□□ -1.98
HOXD10P28358 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD10P28358 MIR5007-201ENST00000583098 95 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 VN1R82P-201ENST00000601481 356 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC011451.2-201ENST00000604303 598 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC090186.1-201ENST00000605991 572 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC103710.4-201ENST00000609301 899 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 AC092192.1-201ENST00000633154 1018 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXD10P28358 CU459211.1-201ENST00000635667 749 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.67□□□□□ -1.98
HOXD10P28358 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
HOXD10P28358 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.67□□□□□ -1.98
HOXD10P28358 AC012321.1-201ENST00000561622 1588 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 ADAM3A-203ENST00000461344 2157 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 RNU5E-8P-201ENST00000363502 116 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 RNU6-660P-201ENST00000364566 109 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 AL356421.1-201ENST00000403255 413 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD10P28358 RN7SKP32-201ENST00000410167 303 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXD10P28358 CCDC58P2-201ENST00000417131 366 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXD10P28358 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXD10P28358 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXD10P28358 COX6CP12-201ENST00000446748 202 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.66□□□□□ -1.98
HOXD10P28358 AC021382.1-201ENST00000483523 359 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
HOXD10P28358 AC117522.2-201ENST00000510049 657 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.66□□□□□ -1.98
HOXD10P28358 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.66□□□□□ -1.98
HOXD10P28358 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXD10P28358 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.66□□□□□ -1.98
HOXD10P28358 ELOCP32-201ENST00000548625 324 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 AC009094.1-201ENST00000564443 426 ntBASIC2.66□□□□□ -1.98
HOXD10P28358 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms