Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 OR56A5-201ENST00000340110 738 ntBASIC2.02□□□□□ -2.09
USF1P22415 SNORA80E-201ENST00000384744 137 ntBASIC2.02□□□□□ -2.09
USF1P22415 MIR19A-201ENST00000384878 82 ntBASIC2.02□□□□□ -2.09
USF1P22415 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.02□□□□□ -2.09
USF1P22415 MTCO2P17-201ENST00000424336 677 ntBASIC2.02□□□□□ -2.09
USF1P22415 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.02□□□□□ -2.09
USF1P22415 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.02□□□□□ -2.09
USF1P22415 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
USF1P22415 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.02□□□□□ -2.09
USF1P22415 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.02□□□□□ -2.09
USF1P22415 MTATP6P30-201ENST00000443540 664 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.02□□□□□ -2.09
USF1P22415 TRBV1-201ENST00000476502 284 ntBASIC2.02□□□□□ -2.09
USF1P22415 MRPL42P6-201ENST00000486397 371 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC092436.1-201ENST00000506450 503 ntBASIC2.02□□□□□ -2.09
USF1P22415 LTV1P1-201ENST00000510683 1237 ntBASIC2.02□□□□□ -2.09
USF1P22415 RN7SKP258-201ENST00000517151 304 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.02□□□□□ -2.09
USF1P22415 IGLV3-17-201ENST00000519099 244 ntBASIC2.02□□□□□ -2.09
USF1P22415 MTCO2P15-201ENST00000532655 656 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.02□□□□□ -2.09
USF1P22415 MRPS36P5-201ENST00000551909 298 ntBASIC2.02□□□□□ -2.09
USF1P22415 PRELID2P1-201ENST00000552837 301 ntBASIC2.02□□□□□ -2.09
USF1P22415 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.02□□□□□ -2.09
USF1P22415 AC135628.1-201ENST00000568867 534 ntBASIC2.02□□□□□ -2.09
USF1P22415 MIR1273D-201ENST00000577266 86 ntBASIC2.02□□□□□ -2.09
USF1P22415 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.02□□□□□ -2.09
USF1P22415 AL391813.1-201ENST00000603098 260 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC098826.3-201ENST00000603823 466 ntBASIC2.02□□□□□ -2.09
USF1P22415 AL592221.1-201ENST00000605266 382 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC007038.2-201ENST00000608095 740 ntBASIC2.02□□□□□ -2.09
USF1P22415 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
USF1P22415 AC079416.3-201ENST00000624479 549 ntBASIC2.02□□□□□ -2.09
USF1P22415 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
USF1P22415 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
USF1P22415 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
USF1P22415 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.01□□□□□ -2.09
USF1P22415 AC006020.1-201ENST00000420179 1854 ntBASIC2.01□□□□□ -2.09
USF1P22415 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.01□□□□□ -2.09
USF1P22415 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
USF1P22415 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
USF1P22415 MIR122-201ENST00000385044 85 ntBASIC2.01□□□□□ -2.09
USF1P22415 RNU2-68P-201ENST00000410878 191 ntBASIC2.01□□□□□ -2.09
USF1P22415 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.01□□□□□ -2.09
USF1P22415 USP9YP27-201ENST00000418455 438 ntBASIC2.01□□□□□ -2.09
USF1P22415 BX276092.3-201ENST00000424182 230 ntBASIC2.01□□□□□ -2.09
USF1P22415 MICF-203ENST00000432679 129 ntBASIC2.01□□□□□ -2.09
USF1P22415 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.01□□□□□ -2.09
USF1P22415 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.01□□□□□ -2.09
USF1P22415 RPL37P6-201ENST00000460682 294 ntBASIC2.01□□□□□ -2.09
USF1P22415 AC134050.1-201ENST00000495088 933 ntBASIC2.01□□□□□ -2.09
USF1P22415 AC026801.1-201ENST00000497178 464 ntBASIC2.01□□□□□ -2.09
USF1P22415 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.01□□□□□ -2.09
USF1P22415 RNA5SP281-201ENST00000516504 135 ntBASIC2.01□□□□□ -2.09
USF1P22415 RNA5SP165-201ENST00000517142 115 ntBASIC2.01□□□□□ -2.09
USF1P22415 BTF3P12-201ENST00000519620 469 ntBASIC2.01□□□□□ -2.09
USF1P22415 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.01□□□□□ -2.09
USF1P22415 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.01□□□□□ -2.09
USF1P22415 AL645944.1-201ENST00000603857 493 ntBASIC2.01□□□□□ -2.09
USF1P22415 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.01□□□□□ -2.09
USF1P22415 AC103710.1-201ENST00000610003 901 ntBASIC2.01□□□□□ -2.09
USF1P22415 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.01□□□□□ -2.09
USF1P22415 AP002791.1-201ENST00000623291 381 ntBASIC2.01□□□□□ -2.09
USF1P22415 MIR1291-201ENST00000627649 87 ntBASIC2.01□□□□□ -2.09
USF1P22415 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.01□□□□□ -2.09
USF1P22415 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
USF1P22415 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 AC007336.1-201ENST00000576365 3828 ntBASIC2□□□□□ -2.09
USF1P22415 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2□□□□□ -2.09
USF1P22415 MTND4P9-201ENST00000507819 1346 ntBASIC2□□□□□ -2.09
USF1P22415 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 SNORA38-201ENST00000363946 132 ntBASIC2□□□□□ -2.09
USF1P22415 RNU1-52P-201ENST00000384190 164 ntBASIC2□□□□□ -2.09
USF1P22415 SNORA41-201ENST00000384675 132 ntBASIC2□□□□□ -2.09
USF1P22415 RNU6-253P-201ENST00000384730 105 ntBASIC2□□□□□ -2.09
USF1P22415 MIR524-201ENST00000385242 87 ntBASIC2□□□□□ -2.09
USF1P22415 RNU6-220P-201ENST00000390919 107 ntBASIC2□□□□□ -2.09
USF1P22415 AL359634.1-202ENST00000404721 284 ntBASIC2□□□□□ -2.09
USF1P22415 MIR1305-201ENST00000408300 86 ntBASIC2□□□□□ -2.09
USF1P22415 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2□□□□□ -2.09
USF1P22415 DNAJA1P2-201ENST00000421360 1197 ntBASIC2□□□□□ -2.09
USF1P22415 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2□□□□□ -2.09
USF1P22415 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2□□□□□ -2.09
USF1P22415 MTCO2P20-201ENST00000437339 673 ntBASIC2□□□□□ -2.09
USF1P22415 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2□□□□□ -2.09
USF1P22415 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2□□□□□ -2.09
USF1P22415 AC106872.3-201ENST00000495104 446 ntBASIC2□□□□□ -2.09
USF1P22415 AC023141.11-201ENST00000508864 202 ntBASIC2□□□□□ -2.09
USF1P22415 AC026436.1-201ENST00000510537 270 ntBASIC2□□□□□ -2.09
USF1P22415 SNORD19.2-201ENST00000516978 73 ntBASIC2□□□□□ -2.09
USF1P22415 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2□□□□□ -2.09
USF1P22415 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2□□□□□ -2.09
USF1P22415 MIR4509-3-201ENST00000578671 94 ntBASIC2□□□□□ -2.09
USF1P22415 AC024619.4-201ENST00000580924 316 ntBASIC2□□□□□ -2.09
USF1P22415 MIR4509-2-201ENST00000583920 94 ntBASIC2□□□□□ -2.09
USF1P22415 AL355598.1-201ENST00000604169 202 ntBASIC2□□□□□ -2.09
USF1P22415 AL161798.1-201ENST00000604630 131 ntBASIC2□□□□□ -2.09
USF1P22415 AC103810.6-201ENST00000606708 136 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms