Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 RNU6-543P-201ENST00000362576 108 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 MIR222-201ENST00000384992 110 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AC099548.1-201ENST00000421443 426 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 RPS3AP44-201ENST00000425466 790 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 USP12PX-201ENST00000432383 1057 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.36□□□□□ -2.19
PTPRFP10586 AL500527.1-201ENST00000448532 255 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 CABYRP1-201ENST00000465493 1045 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.36□□□□□ -2.19
PTPRFP10586 RNA5SP220-201ENST00000516298 104 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AC008676.3-201ENST00000521237 435 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPRFP10586 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.36□□□□□ -2.19
PTPRFP10586 GAS5-AS1-201ENST00000602767 694 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 MFSD8-213ENST00000641134 1327 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
PTPRFP10586 RNU6-582P-201ENST00000362989 107 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AL121978.1-201ENST00000402778 359 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 USP9YP19-201ENST00000412165 485 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 USP9YP13-201ENST00000417797 480 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 HMGB1P49-201ENST00000418882 569 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPRFP10586 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC1.36□□□□□ -2.19
PTPRFP10586 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
PTPRFP10586 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPRFP10586 ANKRD26P4-201ENST00000455755 950 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AC005410.1-202ENST00000460347 485 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 MTND4LP3-201ENST00000468320 276 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPRFP10586 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPRFP10586 AC022483.1-201ENST00000514020 567 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.36□□□□□ -2.19
PTPRFP10586 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.36□□□□□ -2.19
PTPRFP10586 AC123912.5-201ENST00000605470 343 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 BX322635.1-201ENST00000605804 496 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 MIR6788-201ENST00000618842 66 ntBASIC1.36□□□□□ -2.19
PTPRFP10586 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.36□□□□□ -2.19
PTPRFP10586 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
PTPRFP10586 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.36□□□□□ -2.19
PTPRFP10586 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
PTPRFP10586 RNA5SP465-201ENST00000391195 109 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 CYCSP33-201ENST00000414485 327 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPRFP10586 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.35□□□□□ -2.19
PTPRFP10586 HMGB1P9-201ENST00000429856 646 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 AC005345.1-201ENST00000431868 217 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPRFP10586 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPRFP10586 AC147055.4-201ENST00000504399 745 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPRFP10586 AC048346.1-201ENST00000510247 144 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 RNU2-19P-201ENST00000517288 84 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPRFP10586 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.35□□□□□ -2.19
PTPRFP10586 AL031176.1-201ENST00000604554 466 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 MTND4LP5-201ENST00000605152 292 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.35□□□□□ -2.19
PTPRFP10586 AC096586.1-201ENST00000610267 561 ntBASIC1.35□□□□□ -2.19
PTPRFP10586 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 SNORA27.3-201ENST00000364937 134 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AL512604.1-201ENST00000404812 257 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 RNU2-15P-201ENST00000410692 191 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 AC092573.2-201ENST00000434546 243 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.34□□□□□ -2.19
PTPRFP10586 TAAR7P-201ENST00000436141 242 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
PTPRFP10586 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 AC114786.4-201ENST00000508771 728 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AC114797.1-201ENST00000514003 728 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AC022447.1-201ENST00000515358 464 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.34□□□□□ -2.19
PTPRFP10586 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.34□□□□□ -2.19
PTPRFP10586 AP000907.2-201ENST00000530827 353 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AC011604.1-201ENST00000545978 196 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 MTCYBP27-201ENST00000555160 670 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AL391261.3-201ENST00000557194 520 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.34□□□□□ -2.19
PTPRFP10586 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 FAM106DP-201ENST00000586416 501 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AL356585.4-201ENST00000623078 1229 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AC109454.4-201ENST00000623411 649 ntBASIC1.34□□□□□ -2.19
PTPRFP10586 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
PTPRFP10586 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
PTPRFP10586 AL590084.1-201ENST00000407885 387 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 MTCO3P46-201ENST00000425787 232 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.34□□□□□ -2.2
PTPRFP10586 AL353689.1-201ENST00000438895 199 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 AL078601.1-201ENST00000444542 271 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 RAC1P7-201ENST00000445367 377 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 AL353691.1-201ENST00000451332 387 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 PABPC1P3-201ENST00000469174 459 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 AL121769.1-201ENST00000469473 401 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 AC107626.1-201ENST00000471084 183 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 SNORA31.25-201ENST00000517242 134 ntBASIC1.34□□□□□ -2.2
PTPRFP10586 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.34□□□□□ -2.2
PTPRFP10586 MTCYBP23-201ENST00000558717 1102 ntBASIC1.34□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms