Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RNU6-7-201ENST00000364784 107 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RNU6-8-201ENST00000365467 107 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 CD24P4-201ENST00000382840 243 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RPL21P3-201ENST00000395517 478 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RPL5P18-201ENST00000406671 891 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RPS12P24-201ENST00000412619 387 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AL591212.2-201ENST00000433923 257 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC107083.1-201ENST00000439643 279 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 FABP5P13-201ENST00000452144 328 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 MTCO2P18-201ENST00000457151 658 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC146507.2-201ENST00000460608 476 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RPL39P36-201ENST00000490784 156 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC092185.1-201ENST00000491371 97 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 ARL4AP2-201ENST00000507378 601 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 MTND4LP22-201ENST00000508209 276 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC117522.1-201ENST00000509821 380 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 MTCO3P28-201ENST00000513351 515 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RN7SKP298-201ENST00000515950 94 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 SCARNA24.1-201ENST00000516465 137 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RNU6-143P-201ENST00000516942 93 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RNU6-430P-201ENST00000517078 107 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 RNA5SP165-201ENST00000517142 115 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AP002963.1-201ENST00000530590 184 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC068790.2-201ENST00000602601 557 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 BNIP3P9-201ENST00000603714 553 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC100793.4-201ENST00000613683 429 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC092656.1-203ENST00000624134 423 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC006386.2-201ENST00000624491 75 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 AC012005.1-201ENST00000624575 75 ntBASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
RAB40ALP0C0E4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC010680.1-201ENST00000590024 3590 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 SNORA80A-201ENST00000363922 136 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RNU6-1119P-201ENST00000384349 108 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 SAR1AP2-201ENST00000392696 594 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 DEFB108C-201ENST00000400154 252 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RNU2-68P-201ENST00000410878 191 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 PIGFP2-201ENST00000421400 651 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 ISCA1P1-201ENST00000426679 387 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC133104.1-201ENST00000429100 218 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RPL36AP53-201ENST00000432891 316 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 GPR143P-201ENST00000434155 205 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 FABP5P15-201ENST00000453566 214 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC105252.1-201ENST00000503089 286 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RNU1-143P-201ENST00000516296 146 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RNU6-410P-201ENST00000517006 107 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 SNORA31.21-201ENST00000517180 77 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC090572.1-201ENST00000519251 160 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC024909.2-201ENST00000553035 286 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AL391840.1-201ENST00000571144 367 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC174048.1-201ENST00000603389 144 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC073648.5-201ENST00000603502 305 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 NUTF2P8-201ENST00000604593 363 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC245008.1-201ENST00000608123 476 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 U1.23-201ENST00000610293 146 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AL589743.7-201ENST00000612637 233 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC130324.3-201ENST00000614165 542 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AC091834.1-201ENST00000614543 472 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RNU1-68P-201ENST00000615382 146 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 U1.39-201ENST00000621562 146 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 LRRC77P-213ENST00000637727 880 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 AL359693.1-201ENST00000614959 2407 ntBASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
RAB40ALP0C0E4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RAB40ALP0C0E4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.91□□□□□ -1.94
RAB40ALP0C0E4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RAB40ALP0C0E4 Y_RNA.22-201ENST00000362492 102 ntBASIC2.91□□□□□ -1.94
RAB40ALP0C0E4 RNU6-799P-201ENST00000363567 107 ntBASIC2.91□□□□□ -1.94
RAB40ALP0C0E4 U3.6-201ENST00000363622 211 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 257 ms