Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.18□□□□□ -1.74
SNRPA1P09661 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
SNRPA1P09661 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 MTND4P35-201ENST00000604257 1375 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.17□□□□□ -1.74
SNRPA1P09661 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.17□□□□□ -1.74
SNRPA1P09661 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SNRPA1P09661 RNU6-754P-201ENST00000391166 107 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 RNU6-903P-201ENST00000391270 109 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AL109755.1-201ENST00000401791 649 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AL356968.1-201ENST00000416622 474 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 HMGN2P21-201ENST00000447764 270 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 MTND1P18-201ENST00000448191 573 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.17□□□□□ -1.74
SNRPA1P09661 AL118520.1-201ENST00000450770 291 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AC103851.1-201ENST00000506833 274 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.17□□□□□ -1.74
SNRPA1P09661 RNA5SP309-201ENST00000516670 106 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 RNA5SP503-201ENST00000517047 117 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 RNU6-1314P-201ENST00000517139 104 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 AC087241.2-201ENST00000535801 324 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 SCOCP1-201ENST00000554676 349 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AC006270.2-201ENST00000578523 652 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AC006254.3-201ENST00000603353 884 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 AC130324.3-201ENST00000614165 542 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 RMST_7.1-201ENST00000621935 268 ntBASIC4.17□□□□□ -1.74
SNRPA1P09661 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SNRPA1P09661 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
SNRPA1P09661 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
SNRPA1P09661 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SNRPA1P09661 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNRPA1P09661 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNRPA1P09661 AC073343.1-201ENST00000328239 651 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 MIR422A-201ENST00000362286 90 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 Y_RNA.58-201ENST00000362807 102 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 Y_RNA.154-201ENST00000363624 102 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 RNY3P1-201ENST00000365085 102 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 RNU4-66P-201ENST00000365199 138 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 RNY3-201ENST00000365484 102 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 XGY1-201ENST00000381172 446 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 Y_RNA.490-201ENST00000384413 102 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 MIR135A2-201ENST00000384854 100 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 MIR514A2-201ENST00000385131 88 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 MIR514A3-201ENST00000385132 88 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 RN7SKP32-201ENST00000410167 303 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 RPS20P15-201ENST00000412792 311 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.16□□□□□ -1.74
SNRPA1P09661 RPL21P24-201ENST00000413752 448 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 NDUFB4P5-201ENST00000415445 361 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 AC114491.1-201ENST00000416095 246 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 AL158071.1-201ENST00000430315 461 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 ERLEC1P1-201ENST00000433806 578 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 RPL21P99-201ENST00000480369 423 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 HMGN1P28-201ENST00000521340 364 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.16□□□□□ -1.74
SNRPA1P09661 HPRT1P3-201ENST00000539521 576 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 BNIP3P6-201ENST00000549284 499 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.16□□□□□ -1.74
SNRPA1P09661 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.16□□□□□ -1.74
SNRPA1P09661 U73479.1-201ENST00000618062 168 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 AL603758.1-201ENST00000618654 241 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 AP003400.5-201ENST00000624827 617 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 TPTEP1-208ENST00000636884 213 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SNRPA1P09661 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SNRPA1P09661 TAB3P1-202ENST00000452645 1634 ntBASIC4.16□□□□□ -1.74
SNRPA1P09661 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC4.16□□□□□ -1.74
SNRPA1P09661 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNRPA1P09661 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SNRPA1P09661 MTND4P23-201ENST00000447723 1363 ntBASIC4.15□□□□□ -1.74
SNRPA1P09661 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNRPA1P09661 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.15□□□□□ -1.74
SNRPA1P09661 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNRPA1P09661 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.15□□□□□ -1.74
SNRPA1P09661 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNRPA1P09661 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SNRPA1P09661 RNU4-79P-201ENST00000362764 141 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 RNU6-1249P-201ENST00000363237 111 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 RNU6-179P-201ENST00000363350 107 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 RNU6-116P-201ENST00000384042 109 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AL606923.1-201ENST00000406616 190 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 RNA5SP229-201ENST00000410809 99 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 AL645937.1-202ENST00000421799 937 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AC002075.2-201ENST00000425207 252 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.15□□□□□ -1.75
SNRPA1P09661 RPL23AP82-202ENST00000427528 469 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 IFNA20P-201ENST00000436840 528 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SNRPA1P09661 AL121877.1-201ENST00000453704 622 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AL590639.1-201ENST00000456484 337 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 AP001486.1-201ENST00000463339 476 ntBASIC4.15□□□□□ -1.75
SNRPA1P09661 CENPBD1P1-201ENST00000464061 469 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms