Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU7-136P-201ENST00000458819 69 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AC005410.1-202ENST00000460347 485 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AP001324.2-201ENST00000461163 319 ntBASIC2.04□□□□□ -2.08
TPM1P09493 RPL23AP42-201ENST00000471152 471 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.04□□□□□ -2.08
TPM1P09493 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.04□□□□□ -2.08
TPM1P09493 RNU6-583P-201ENST00000516012 92 ntBASIC2.04□□□□□ -2.08
TPM1P09493 RNU6-927P-201ENST00000516199 100 ntBASIC2.04□□□□□ -2.08
TPM1P09493 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
TPM1P09493 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.04□□□□□ -2.08
TPM1P09493 ROCK1P1-201ENST00000573767 549 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.04□□□□□ -2.08
TPM1P09493 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.04□□□□□ -2.08
TPM1P09493 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.04□□□□□ -2.08
TPM1P09493 AL353997.4-201ENST00000586196 166 ntBASIC2.04□□□□□ -2.08
TPM1P09493 NRBF2P1-201ENST00000587407 859 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.04□□□□□ -2.08
TPM1P09493 VN1R87P-201ENST00000596706 487 ntBASIC2.04□□□□□ -2.08
TPM1P09493 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
TPM1P09493 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.04□□□□□ -2.08
TPM1P09493 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.04□□□□□ -2.08
TPM1P09493 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
TPM1P09493 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
TPM1P09493 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.03□□□□□ -2.08
TPM1P09493 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
TPM1P09493 AL161781.1-201ENST00000354277 403 ntBASIC2.03□□□□□ -2.08
TPM1P09493 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
TPM1P09493 RNU6-1122P-201ENST00000384449 107 ntBASIC2.03□□□□□ -2.08
TPM1P09493 RNU6-114P-201ENST00000384704 105 ntBASIC2.03□□□□□ -2.08
TPM1P09493 RNU6-19P-201ENST00000384718 107 ntBASIC2.03□□□□□ -2.08
TPM1P09493 U8.14-201ENST00000390843 143 ntBASIC2.03□□□□□ -2.08
TPM1P09493 RNU6-952P-201ENST00000391164 108 ntBASIC2.03□□□□□ -2.08
TPM1P09493 HMGN2P39-201ENST00000398005 273 ntBASIC2.03□□□□□ -2.08
TPM1P09493 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM1P09493 COX7BP2-201ENST00000437976 242 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AC009238.1-201ENST00000442165 424 ntBASIC2.03□□□□□ -2.08
TPM1P09493 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM1P09493 AC009237.6-201ENST00000446969 424 ntBASIC2.03□□□□□ -2.08
TPM1P09493 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM1P09493 AC027338.1-201ENST00000514840 825 ntBASIC2.03□□□□□ -2.08
TPM1P09493 RNA5SP165-201ENST00000517142 115 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM1P09493 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.03□□□□□ -2.08
TPM1P09493 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM1P09493 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.03□□□□□ -2.08
TPM1P09493 MIR5708-201ENST00000579723 85 ntBASIC2.03□□□□□ -2.08
TPM1P09493 MIR3618-201ENST00000580330 88 ntBASIC2.03□□□□□ -2.08
TPM1P09493 BBIP1P1-201ENST00000602999 279 ntBASIC2.03□□□□□ -2.08
TPM1P09493 MTCYBP22-201ENST00000603788 447 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AL355598.1-201ENST00000604169 202 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AC007038.2-201ENST00000608095 740 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AC011939.3-201ENST00000613686 466 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AC005296.1-201ENST00000616145 209 ntBASIC2.03□□□□□ -2.08
TPM1P09493 AC109809.1-201ENST00000619665 545 ntBASIC2.03□□□□□ -2.08
TPM1P09493 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM1P09493 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
TPM1P09493 AL589826.1-201ENST00000340697 249 ntBASIC2.02□□□□□ -2.09
TPM1P09493 RNU6-223P-201ENST00000362830 107 ntBASIC2.02□□□□□ -2.09
TPM1P09493 SNORA67.3-201ENST00000384366 140 ntBASIC2.02□□□□□ -2.09
TPM1P09493 NDUFS5P1-201ENST00000405668 289 ntBASIC2.02□□□□□ -2.09
TPM1P09493 RNU2-68P-201ENST00000410878 191 ntBASIC2.02□□□□□ -2.09
TPM1P09493 BTF3P8-201ENST00000414577 526 ntBASIC2.02□□□□□ -2.09
TPM1P09493 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM1P09493 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM1P09493 PTGES3P4-201ENST00000426243 356 ntBASIC2.02□□□□□ -2.09
TPM1P09493 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
TPM1P09493 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM1P09493 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM1P09493 TPT1P14-201ENST00000448018 505 ntBASIC2.02□□□□□ -2.09
TPM1P09493 PPP1R2P5-201ENST00000457256 603 ntBASIC2.02□□□□□ -2.09
TPM1P09493 RPL22P13-201ENST00000493291 347 ntBASIC2.02□□□□□ -2.09
TPM1P09493 MTCYBP16-201ENST00000509187 1129 ntBASIC2.02□□□□□ -2.09
TPM1P09493 MTND5P13-201ENST00000513046 1079 ntBASIC2.02□□□□□ -2.09
TPM1P09493 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM1P09493 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM1P09493 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.02□□□□□ -2.09
TPM1P09493 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM1P09493 CYB5AP5-201ENST00000549779 389 ntBASIC2.02□□□□□ -2.09
TPM1P09493 AF038458.1-201ENST00000588406 262 ntBASIC2.02□□□□□ -2.09
TPM1P09493 SNRPGP19-201ENST00000603826 189 ntBASIC2.02□□□□□ -2.09
TPM1P09493 AL355297.2-201ENST00000604792 129 ntBASIC2.02□□□□□ -2.09
TPM1P09493 DUSP12P1-201ENST00000612874 516 ntBASIC2.02□□□□□ -2.09
TPM1P09493 AC008759.3-201ENST00000613300 508 ntBASIC2.02□□□□□ -2.09
TPM1P09493 AC020658.4-201ENST00000613987 684 ntBASIC2.02□□□□□ -2.09
TPM1P09493 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TPM1P09493 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TPM1P09493 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
TPM1P09493 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TPM1P09493 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
TPM1P09493 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
TPM1P09493 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.01□□□□□ -2.09
TPM1P09493 RNA5SP240-201ENST00000365355 128 ntBASIC2.01□□□□□ -2.09
TPM1P09493 RNU6-748P-201ENST00000384648 107 ntBASIC2.01□□□□□ -2.09
TPM1P09493 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM1P09493 BTF3L4P3-201ENST00000418879 476 ntBASIC2.01□□□□□ -2.09
TPM1P09493 AL353729.1-201ENST00000425044 720 ntBASIC2.01□□□□□ -2.09
TPM1P09493 DNAJC19P4-201ENST00000440115 345 ntBASIC2.01□□□□□ -2.09
TPM1P09493 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
TPM1P09493 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM1P09493 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms