Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CD74P04233 AC138853.1-201ENST00000503549 823 ntBASIC1.99□□□□□ -2.09
CD74P04233 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.99□□□□□ -2.09
CD74P04233 AC023141.11-201ENST00000508864 202 ntBASIC1.99□□□□□ -2.09
CD74P04233 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CD74P04233 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.99□□□□□ -2.09
CD74P04233 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.99□□□□□ -2.09
CD74P04233 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.99□□□□□ -2.09
CD74P04233 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.99□□□□□ -2.09
CD74P04233 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC1.99□□□□□ -2.09
CD74P04233 MIR4319-201ENST00000577285 85 ntBASIC1.99□□□□□ -2.09
CD74P04233 AC025588.2-201ENST00000604851 466 ntBASIC1.99□□□□□ -2.09
CD74P04233 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CD74P04233 AC007038.2-201ENST00000608095 740 ntBASIC1.99□□□□□ -2.09
CD74P04233 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.99□□□□□ -2.09
CD74P04233 AC008498.1-201ENST00000613012 531 ntBASIC1.99□□□□□ -2.09
CD74P04233 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.99□□□□□ -2.09
CD74P04233 AC013476.2-201ENST00000614456 459 ntBASIC1.99□□□□□ -2.09
CD74P04233 AP000676.3-201ENST00000623299 569 ntBASIC1.99□□□□□ -2.09
CD74P04233 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.99□□□□□ -2.09
CD74P04233 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CD74P04233 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.99□□□□□ -2.09
CD74P04233 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CD74P04233 RNU6-301P-201ENST00000384277 107 ntBASIC1.98□□□□□ -2.09
CD74P04233 MIR19A-201ENST00000384878 82 ntBASIC1.98□□□□□ -2.09
CD74P04233 RSL24D1P4-201ENST00000400938 484 ntBASIC1.98□□□□□ -2.09
CD74P04233 MIR1305-201ENST00000408300 86 ntBASIC1.98□□□□□ -2.09
CD74P04233 RPL21P24-201ENST00000413752 448 ntBASIC1.98□□□□□ -2.09
CD74P04233 RPS24P7-201ENST00000416921 246 ntBASIC1.98□□□□□ -2.09
CD74P04233 VPS26BP1-201ENST00000417155 755 ntBASIC1.98□□□□□ -2.09
CD74P04233 AL451054.2-201ENST00000420896 202 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC019097.1-201ENST00000424783 735 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC063976.3-201ENST00000426849 329 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.98□□□□□ -2.09
CD74P04233 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 MTCO3P45-201ENST00000443036 613 ntBASIC1.98□□□□□ -2.09
CD74P04233 RPL7P36-201ENST00000444633 681 ntBASIC1.98□□□□□ -2.09
CD74P04233 AP1S2P1-201ENST00000457344 379 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC010631.1-201ENST00000474150 156 ntBASIC1.98□□□□□ -2.09
CD74P04233 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CD74P04233 GZMAP1-201ENST00000503054 631 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 LTV1P1-201ENST00000510683 1237 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.98□□□□□ -2.09
CD74P04233 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.98□□□□□ -2.09
CD74P04233 RN7SKP24-201ENST00000515888 284 ntBASIC1.98□□□□□ -2.09
CD74P04233 RNU5F-8P-201ENST00000515941 111 ntBASIC1.98□□□□□ -2.09
CD74P04233 RN7SKP132-201ENST00000516001 208 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.98□□□□□ -2.09
CD74P04233 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 AL133153.1-201ENST00000557756 303 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 AC027807.1-201ENST00000559921 996 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 AC009097.3-201ENST00000563557 1018 ntBASIC1.98□□□□□ -2.09
CD74P04233 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.98□□□□□ -2.09
CD74P04233 AC234772.3-201ENST00000602277 528 ntBASIC1.98□□□□□ -2.09
CD74P04233 DPPA3P3-201ENST00000603842 430 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC091965.4-201ENST00000607691 587 ntBASIC1.98□□□□□ -2.09
CD74P04233 MIR6840-201ENST00000611937 71 ntBASIC1.98□□□□□ -2.09
CD74P04233 AC012150.2-201ENST00000621300 544 ntBASIC1.98□□□□□ -2.09
CD74P04233 MIR1291-201ENST00000627649 87 ntBASIC1.98□□□□□ -2.09
CD74P04233 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.98□□□□□ -2.09
CD74P04233 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
CD74P04233 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
CD74P04233 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CD74P04233 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
CD74P04233 AL365361.1-201ENST00000566942 3481 ntBASIC1.97□□□□□ -2.09
CD74P04233 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CD74P04233 Y_RNA.18-201ENST00000362461 102 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNU6-859P-201ENST00000362728 107 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNU6-223P-201ENST00000362830 107 ntBASIC1.97□□□□□ -2.09
CD74P04233 SNORD113-6-201ENST00000363345 75 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNU6-1214P-201ENST00000363650 109 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNU6-660P-201ENST00000364566 109 ntBASIC1.97□□□□□ -2.09
CD74P04233 Y_RNA.302-201ENST00000364997 102 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNU6-217P-201ENST00000384164 104 ntBASIC1.97□□□□□ -2.09
CD74P04233 RNU6-769P-201ENST00000384407 104 ntBASIC1.97□□□□□ -2.09
CD74P04233 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CD74P04233 AL139039.1-201ENST00000401900 692 ntBASIC1.97□□□□□ -2.09
CD74P04233 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.97□□□□□ -2.09
CD74P04233 AC096649.2-201ENST00000416186 393 ntBASIC1.97□□□□□ -2.09
CD74P04233 RPL22P18-201ENST00000417197 377 ntBASIC1.97□□□□□ -2.09
CD74P04233 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.97□□□□□ -2.09
CD74P04233 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.97□□□□□ -2.09
CD74P04233 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms