Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC090115.4-201ENST00000609970 188 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND1P03886 AC010133.1-201ENST00000615809 842 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 UCA1.1-201ENST00000620952 75 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 AC010338.1-201ENST00000621823 717 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 FARSBP1-201ENST00000435808 1778 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
MT-ND1P03886 AC026241.1-201ENST00000517873 2142 ntBASIC2.68□□□□□ -1.98
MT-ND1P03886 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.67□□□□□ -1.98
MT-ND1P03886 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND1P03886 SNORA71.3-201ENST00000362582 128 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 Y_RNA.41-201ENST00000362646 102 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 SNORD56.5-201ENST00000364281 72 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 SNORA71.1-201ENST00000364523 117 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND1P03886 RNVU1-14-201ENST00000384770 164 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 MRPL42P2-201ENST00000403169 426 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 RNU2-33P-201ENST00000410344 192 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 RN7SKP140-201ENST00000411196 284 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AL513331.1-201ENST00000411908 397 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 RPL21P24-201ENST00000413752 448 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC2.67□□□□□ -1.98
MT-ND1P03886 ZNF863P-201ENST00000426746 417 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC007919.1-201ENST00000429380 217 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 YME1L1P1-201ENST00000429435 297 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.67□□□□□ -1.98
MT-ND1P03886 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 MTND1P12-201ENST00000455231 147 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC108059.3-201ENST00000456388 214 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC008481.1-201ENST00000463278 396 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 RN7SL504P-201ENST00000494496 287 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND1P03886 AC074250.1-201ENST00000511117 192 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC008885.1-201ENST00000514930 301 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND1P03886 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND1P03886 AC022616.3-201ENST00000523940 148 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC128657.1-201ENST00000549459 145 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AC009063.1-201ENST00000563342 702 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AF038458.1-201ENST00000588406 262 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC005498.1-201ENST00000592125 465 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC002545.1-201ENST00000592511 181 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC078795.2-201ENST00000602835 1252 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AL139286.2-201ENST00000606838 396 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC104073.3-201ENST00000610942 955 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 HULC.1-201ENST00000612720 240 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC091834.1-201ENST00000614543 472 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC084757.4-201ENST00000616350 526 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 AC099842.1-201ENST00000619919 596 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 MIR6075-201ENST00000620782 95 ntBASIC2.67□□□□□ -1.98
MT-ND1P03886 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.67□□□□□ -1.98
MT-ND1P03886 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
MT-ND1P03886 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.67□□□□□ -1.98
MT-ND1P03886 AC092593.1-201ENST00000515413 1815 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND1P03886 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
MT-ND1P03886 RNU6-169P-201ENST00000365336 107 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 RNU6-278P-201ENST00000390945 109 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 FO393413.1-201ENST00000402892 195 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 RNU2-36P-201ENST00000410361 191 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 RNU2-16P-201ENST00000410712 136 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC127391.1-201ENST00000411737 98 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 ELOCP17-201ENST00000414751 326 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 RPL7P10-201ENST00000417407 739 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND1P03886 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND1P03886 AL451054.2-201ENST00000420896 202 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC091390.3-201ENST00000426478 338 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND1P03886 AC009414.1-201ENST00000427200 443 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC010975.2-201ENST00000427781 588 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 RPL31P35-201ENST00000431058 377 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND1P03886 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND1P03886 USP9YP15-201ENST00000442391 422 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 NANOGNBP1-201ENST00000448444 480 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC079448.1-201ENST00000449377 373 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.66□□□□□ -1.98
MT-ND1P03886 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.66□□□□□ -1.98
MT-ND1P03886 RPL27AP5-201ENST00000469428 449 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 KC877373.1-201ENST00000479066 408 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC004924.1-201ENST00000480160 781 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC011825.1-201ENST00000484967 388 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
MT-ND1P03886 AC006445.1-201ENST00000491925 405 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AL358832.1-201ENST00000497800 389 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.66□□□□□ -1.98
MT-ND1P03886 SEM1P1-201ENST00000506694 209 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 CDC42P4-201ENST00000510507 563 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 RNU6-430P-201ENST00000517078 107 ntBASIC2.66□□□□□ -1.98
MT-ND1P03886 PSMA2P1-201ENST00000526365 646 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms