Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 AP003072.2-201ENST00000527756 676 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC068714.1-201ENST00000559623 800 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC004817.2-201ENST00000561794 651 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 VN1R107P-201ENST00000601784 209 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 DPPA3P3-201ENST00000603842 430 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 CYP2C61P-201ENST00000604072 290 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AP001330.4-201ENST00000604350 154 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC080078.3-201ENST00000605407 463 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 OR10AB1P-201ENST00000609613 938 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC090425.1-201ENST00000610007 140 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL3A1P02461 AC084781.2-201ENST00000615568 161 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 MTND4P14-201ENST00000435799 1354 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC092447.10-201ENST00000620607 1652 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 OR4G1P-203ENST00000641984 1631 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 MTCO1P24-201ENST00000515438 1558 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC062016.1-201ENST00000355719 319 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 Y_RNA.255-201ENST00000364581 97 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL3A1P02461 RNU6-574P-201ENST00000384265 107 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 RNU2-9P-201ENST00000410194 145 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 NUP35P1-201ENST00000422734 947 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AL358176.2-201ENST00000425769 204 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 RNU7-63P-201ENST00000459054 62 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC007547.1-201ENST00000462177 490 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC010587.1-201ENST00000505809 469 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC008562.1-201ENST00000521763 330 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.86□□□□□ -1.79
COL3A1P02461 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL3A1P02461 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL3A1P02461 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 FRG2DP-202ENST00000566967 323 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC022884.3-201ENST00000579571 248 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC010680.4-201ENST00000605334 543 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AL022345.1-201ENST00000607292 135 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC013412.1-201ENST00000610687 192 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AL442067.1-201ENST00000613261 223 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 AC130324.3-201ENST00000614165 542 ntBASIC3.86□□□□□ -1.79
COL3A1P02461 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.86□□□□□ -1.79
COL3A1P02461 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.85□□□□□ -1.79
COL3A1P02461 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
COL3A1P02461 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL3A1P02461 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.85□□□□□ -1.79
COL3A1P02461 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL3A1P02461 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL3A1P02461 RNU5E-1-201ENST00000362477 120 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 RNU6-1318P-201ENST00000365389 103 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 RNU6-952P-201ENST00000391164 108 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 RPL21P3-201ENST00000395517 478 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AL356057.3-201ENST00000402607 340 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.85□□□□□ -1.79
COL3A1P02461 AL451054.2-201ENST00000420896 202 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.85□□□□□ -1.79
COL3A1P02461 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.85□□□□□ -1.79
COL3A1P02461 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.85□□□□□ -1.79
COL3A1P02461 GPR143P-201ENST00000434155 205 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AC119618.1-201ENST00000434191 222 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.85□□□□□ -1.79
COL3A1P02461 RSU1P2-202ENST00000437884 485 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 FAM103A2P-201ENST00000444122 354 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.85□□□□□ -1.79
COL3A1P02461 AC146507.2-201ENST00000460608 476 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 RPL21P71-201ENST00000465598 459 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 EIF4EP3-201ENST00000498782 656 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.85□□□□□ -1.79
COL3A1P02461 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.85□□□□□ -1.79
COL3A1P02461 RNU6-559P-201ENST00000516151 98 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 RN7SKP272-201ENST00000516988 232 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 Y_RNA.718-201ENST00000517110 102 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.85□□□□□ -1.79
COL3A1P02461 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.85□□□□□ -1.79
COL3A1P02461 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.85□□□□□ -1.79
COL3A1P02461 SCOCP1-201ENST00000554676 349 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 HSPE1P3-201ENST00000559254 309 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AC110588.1-201ENST00000559699 137 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AC026464.5-201ENST00000562497 722 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 ATP1B3P1-201ENST00000605365 821 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 CTHRC1P1-201ENST00000605383 469 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 AC019193.3-201ENST00000609144 554 ntBASIC3.85□□□□□ -1.79
COL3A1P02461 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
COL3A1P02461 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.84□□□□□ -1.79
COL3A1P02461 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL3A1P02461 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms