Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL133173.2-201ENST00000614270 90 ntBASIC3.23□□□□□ -1.89
LDLRP01130 AL359697.1-201ENST00000624879 587 ntBASIC3.23□□□□□ -1.89
LDLRP01130 PISRT1-201ENST00000626175 531 ntBASIC3.23□□□□□ -1.89
LDLRP01130 LRRC77P-213ENST00000637727 880 ntBASIC3.23□□□□□ -1.89
LDLRP01130 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.23□□□□□ -1.89
LDLRP01130 MAPK10-362ENST00000641864 4484 ntBASIC3.23□□□□□ -1.89
LDLRP01130 SRP72P2-201ENST00000344851 1979 ntBASIC3.23□□□□□ -1.89
LDLRP01130 FARSBP1-201ENST00000435808 1778 ntBASIC3.23□□□□□ -1.89
LDLRP01130 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 AL035425.3-201ENST00000564206 4996 ntBASIC3.22□□□□□ -1.89
LDLRP01130 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.22□□□□□ -1.89
LDLRP01130 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 RNU4-35P-201ENST00000362588 141 ntBASIC3.22□□□□□ -1.89
LDLRP01130 RNU5A-1-201ENST00000362698 116 ntBASIC3.22□□□□□ -1.89
LDLRP01130 Y_RNA.89-201ENST00000363031 102 ntBASIC3.22□□□□□ -1.89
LDLRP01130 RNU6-534P-201ENST00000364877 106 ntBASIC3.22□□□□□ -1.89
LDLRP01130 Y_RNA.296-201ENST00000364930 108 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AL591034.1-201ENST00000407447 340 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.22□□□□□ -1.89
LDLRP01130 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.22□□□□□ -1.89
LDLRP01130 MTCO2P11-201ENST00000431069 680 ntBASIC3.22□□□□□ -1.89
LDLRP01130 HMGB3P11-201ENST00000440127 604 ntBASIC3.22□□□□□ -1.89
LDLRP01130 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.22□□□□□ -1.89
LDLRP01130 RN7SL429P-201ENST00000479090 223 ntBASIC3.22□□□□□ -1.89
LDLRP01130 RN7SL489P-201ENST00000486185 223 ntBASIC3.22□□□□□ -1.89
LDLRP01130 RN7SL327P-201ENST00000488659 223 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.22□□□□□ -1.89
LDLRP01130 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.22□□□□□ -1.89
LDLRP01130 RNA5SP337-201ENST00000517007 109 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AP001893.2-201ENST00000526949 202 ntBASIC3.22□□□□□ -1.89
LDLRP01130 FAM92A1P1-201ENST00000528023 890 ntBASIC3.22□□□□□ -1.89
LDLRP01130 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.22□□□□□ -1.89
LDLRP01130 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.22□□□□□ -1.89
LDLRP01130 HMGB1P33-201ENST00000563485 527 ntBASIC3.22□□□□□ -1.89
LDLRP01130 LARP7P3-201ENST00000579888 337 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AC008752.3-201ENST00000588113 712 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.22□□□□□ -1.89
LDLRP01130 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.22□□□□□ -1.89
LDLRP01130 BDH2P1-201ENST00000602288 736 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AC116312.1-201ENST00000606841 314 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AL161734.1-201ENST00000609720 557 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AC103710.1-201ENST00000610003 901 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AL020991.1-201ENST00000612314 373 ntBASIC3.22□□□□□ -1.89
LDLRP01130 AC010133.1-201ENST00000615809 842 ntBASIC3.22□□□□□ -1.89
LDLRP01130 uc_338.12-201ENST00000616344 181 ntBASIC3.22□□□□□ -1.89
LDLRP01130 RN7SL853P-201ENST00000617250 223 ntBASIC3.22□□□□□ -1.89
LDLRP01130 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDLRP01130 MTND5P17-201ENST00000418405 1603 ntBASIC3.22□□□□□ -1.89
LDLRP01130 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
LDLRP01130 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
LDLRP01130 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
LDLRP01130 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
LDLRP01130 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
LDLRP01130 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
LDLRP01130 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.21□□□□□ -1.9
LDLRP01130 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LDLRP01130 FRG1CP-201ENST00000358464 769 ntBASIC3.21□□□□□ -1.9
LDLRP01130 RNU4-1-201ENST00000363925 141 ntBASIC3.21□□□□□ -1.9
LDLRP01130 Y_RNA.295-201ENST00000364918 102 ntBASIC3.21□□□□□ -1.9
LDLRP01130 Y_RNA.409-201ENST00000383990 98 ntBASIC3.21□□□□□ -1.9
LDLRP01130 Y_RNA.509-201ENST00000384506 99 ntBASIC3.21□□□□□ -1.9
LDLRP01130 RNU6-1011P-201ENST00000384668 107 ntBASIC3.21□□□□□ -1.9
LDLRP01130 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LDLRP01130 RNU1-101P-201ENST00000391171 127 ntBASIC3.21□□□□□ -1.9
LDLRP01130 RPL23AP32-201ENST00000395315 459 ntBASIC3.21□□□□□ -1.9
LDLRP01130 TXNP7-201ENST00000406296 293 ntBASIC3.21□□□□□ -1.9
LDLRP01130 RNU2-8P-201ENST00000410727 190 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.21□□□□□ -1.9
LDLRP01130 AC008850.1-201ENST00000427546 362 ntBASIC3.21□□□□□ -1.9
LDLRP01130 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.21□□□□□ -1.9
LDLRP01130 AC005094.1-201ENST00000440420 368 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.21□□□□□ -1.9
LDLRP01130 MTCO3P45-201ENST00000443036 613 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AC079448.1-201ENST00000449377 373 ntBASIC3.21□□□□□ -1.9
LDLRP01130 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.21□□□□□ -1.9
LDLRP01130 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LDLRP01130 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
LDLRP01130 RBM43P1-201ENST00000476891 1081 ntBASIC3.21□□□□□ -1.9
LDLRP01130 HSPE1P6-201ENST00000479457 291 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AL049874.1-201ENST00000489560 388 ntBASIC3.21□□□□□ -1.9
LDLRP01130 HMGN1P12-201ENST00000499125 195 ntBASIC3.21□□□□□ -1.9
LDLRP01130 Y_RNA.704-201ENST00000516851 102 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
LDLRP01130 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.21□□□□□ -1.9
LDLRP01130 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.21□□□□□ -1.9
LDLRP01130 OR4H12P-201ENST00000556269 907 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.21□□□□□ -1.9
LDLRP01130 AL138976.2-201ENST00000563989 694 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
LDLRP01130 AC005951.2-201ENST00000576282 495 ntBASIC3.21□□□□□ -1.9
LDLRP01130 UBE2V2P2-201ENST00000587677 504 ntBASIC3.21□□□□□ -1.9
LDLRP01130 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms