Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.09□□□□□ -2.23
POLR1AO95602 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.09□□□□□ -2.23
POLR1AO95602 MTND4LP24-201ENST00000572277 291 ntBASIC1.09□□□□□ -2.23
POLR1AO95602 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.09□□□□□ -2.23
POLR1AO95602 MIR3616-201ENST00000584070 92 ntBASIC1.09□□□□□ -2.23
POLR1AO95602 PCNAP1-202ENST00000595299 752 ntBASIC1.09□□□□□ -2.23
POLR1AO95602 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.09□□□□□ -2.23
POLR1AO95602 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
POLR1AO95602 MIR1250-201ENST00000408098 113 ntBASIC1.09□□□□□ -2.24
POLR1AO95602 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.09□□□□□ -2.24
POLR1AO95602 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.09□□□□□ -2.24
POLR1AO95602 RPL39P29-201ENST00000447779 157 ntBASIC1.09□□□□□ -2.24
POLR1AO95602 ANKRD26P4-201ENST00000455755 950 ntBASIC1.09□□□□□ -2.24
POLR1AO95602 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.09□□□□□ -2.24
POLR1AO95602 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.09□□□□□ -2.24
POLR1AO95602 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.09□□□□□ -2.24
POLR1AO95602 AC012254.4-201ENST00000588843 273 ntBASIC1.09□□□□□ -2.24
POLR1AO95602 AP001485.1-201ENST00000604799 199 ntBASIC1.09□□□□□ -2.24
POLR1AO95602 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.09□□□□□ -2.24
POLR1AO95602 AL355810.1-201ENST00000614629 552 ntBASIC1.09□□□□□ -2.24
POLR1AO95602 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
POLR1AO95602 U8.14-201ENST00000390843 143 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 RNU6-920P-201ENST00000410926 92 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 VN1R36P-201ENST00000414936 291 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.08□□□□□ -2.24
POLR1AO95602 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 RNF2P1-201ENST00000442955 1010 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 OSTCP8-201ENST00000445117 448 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.08□□□□□ -2.24
POLR1AO95602 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.08□□□□□ -2.24
POLR1AO95602 AL355812.1-201ENST00000603215 216 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 AL133370.2-201ENST00000619934 439 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 AC090517.3-201ENST00000625170 141 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 OR4G3P-201ENST00000633500 913 ntBASIC1.08□□□□□ -2.24
POLR1AO95602 SNORA68.1-201ENST00000364537 132 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 RNU6-19P-201ENST00000384718 107 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 AC018630.2-202ENST00000422992 927 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 USP12PX-201ENST00000432383 1057 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 Z77249.1-201ENST00000444622 1175 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 AC023141.11-201ENST00000508864 202 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.07□□□□□ -2.24
POLR1AO95602 RNA5SP337-201ENST00000517007 109 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.07□□□□□ -2.24
POLR1AO95602 AC095031.1-201ENST00000623685 672 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 AL356473.1-201ENST00000406203 1408 ntBASIC1.07□□□□□ -2.24
POLR1AO95602 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
POLR1AO95602 MIR508-201ENST00000384857 115 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 RPS4XP3-201ENST00000398541 413 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1AO95602 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
POLR1AO95602 HAR1A.1-201ENST00000459583 118 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 OR2A41P-201ENST00000473586 105 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
POLR1AO95602 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR1AO95602 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR1AO95602 AC025594.3-201ENST00000613068 790 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 CCT4P2-201ENST00000233836 1548 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 MIR126-201ENST00000362291 85 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 AC087884.1-201ENST00000469738 328 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 TPT1P8-201ENST00000510120 555 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.06□□□□□ -2.24
POLR1AO95602 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.06□□□□□ -2.24
POLR1AO95602 AC078899.2-201ENST00000595282 212 ntBASIC1.06□□□□□ -2.24
POLR1AO95602 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.05□□□□□ -2.24
POLR1AO95602 AL356131.1-201ENST00000405826 414 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 ZNF965P-201ENST00000432501 817 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR1AO95602 OR6C72P-201ENST00000451403 892 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 AC067942.3-201ENST00000512025 362 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR1AO95602 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.05□□□□□ -2.24
POLR1AO95602 MIR5571-201ENST00000577998 113 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.05□□□□□ -2.24
POLR1AO95602 7SK.7-201ENST00000603504 247 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 AC025588.4-201ENST00000615802 908 ntBASIC1.05□□□□□ -2.24
POLR1AO95602 RNA5SP499-201ENST00000363982 119 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 AL512604.1-201ENST00000404812 257 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 AC012497.1-201ENST00000429392 575 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 FTH1P12-201ENST00000432137 551 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 AL031663.1-201ENST00000437445 219 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
POLR1AO95602 SNRPGP6-201ENST00000451124 220 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 snoU13.4-201ENST00000458916 104 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR1AO95602 AC103851.1-201ENST00000506833 274 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 AC091965.2-201ENST00000512324 613 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.04□□□□□ -2.24
POLR1AO95602 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC1.04□□□□□ -2.24
POLR1AO95602 VN1R81P-201ENST00000602085 372 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 AC055764.2-201ENST00000610089 670 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 MIR6864-201ENST00000617935 70 ntBASIC1.04□□□□□ -2.24
POLR1AO95602 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
POLR1AO95602 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.04□□□□□ -2.24
POLR1AO95602 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
POLR1AO95602 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
POLR1AO95602 MTCYBP24-201ENST00000420387 1106 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 LARP7P4-201ENST00000481075 878 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AP001960.1-201ENST00000506494 658 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AK3P2-201ENST00000507976 429 ntBASIC1.03□□□□□ -2.24
POLR1AO95602 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms