Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC109464.2-201ENST00000510242 943 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 RNU6-1129P-201ENST00000515964 104 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 MYL12BP1-201ENST00000569826 507 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 MIR4435-1-201ENST00000582552 80 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC097468.3-201ENST00000607956 456 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC004852.3-201ENST00000614131 326 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 ZNF355P-201ENST00000427301 3216 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AL139276.1-201ENST00000311910 1001 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 HSPE1P11-201ENST00000339579 310 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 OR56A5-201ENST00000340110 738 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AL161781.1-201ENST00000354277 403 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CTDNEP1O95476 RNU6-359P-201ENST00000365466 108 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 RNA5SP88-201ENST00000365560 109 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC119751.3-201ENST00000399720 670 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 RNU2-43P-201ENST00000410306 190 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC098592.1-201ENST00000419352 333 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC024082.2-201ENST00000434771 238 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC090774.1-201ENST00000435925 246 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 UBE2D3P1-201ENST00000436669 444 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 SNRPEP7-201ENST00000438350 220 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AL354941.1-201ENST00000438600 464 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 RPS15AP7-201ENST00000439294 405 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 RPL26P6-201ENST00000440913 438 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC009237.8-201ENST00000445492 379 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC011753.1-201ENST00000451001 220 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 RPL23AP35-201ENST00000451906 501 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 snoU13.8-201ENST00000458890 104 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 snoU13.28-201ENST00000459235 104 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AL049714.1-201ENST00000466686 347 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC093809.1-201ENST00000509155 340 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 HMGB3P3-201ENST00000510526 400 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 SNORA31.22-201ENST00000517204 135 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 SUB1P1-201ENST00000524415 382 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 MIR3935-201ENST00000583472 104 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.23□□□□□ -2.05
CTDNEP1O95476 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC007671.2-201ENST00000637344 619 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTDNEP1O95476 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTDNEP1O95476 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTDNEP1O95476 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTDNEP1O95476 MTND4P16-201ENST00000466108 1367 ntBASIC2.23□□□□□ -2.05
CTDNEP1O95476 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CTDNEP1O95476 AC092447.10-201ENST00000620607 1652 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 SDAD1P2-201ENST00000441308 2028 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 RNU6-660P-201ENST00000364566 109 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AL590084.2-201ENST00000401481 382 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AL356421.1-201ENST00000403255 413 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 RN7SKP266-201ENST00000410232 287 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC083875.1-201ENST00000419509 405 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 THAP5P1-201ENST00000439089 262 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 MTND5P2-201ENST00000442927 1142 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC009296.1-201ENST00000443146 155 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AL592447.1-201ENST00000447592 540 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 RNU6-420P-201ENST00000458780 107 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC021382.1-201ENST00000483523 359 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 FAM172BP-201ENST00000487497 1089 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 RPS29P21-201ENST00000496272 170 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 HMGN1P28-201ENST00000521340 364 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 ELOCP32-201ENST00000548625 324 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC010546.1-201ENST00000569391 485 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 MIR4648-201ENST00000580107 72 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 MIR544B-201ENST00000582372 78 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 OR1M4P-201ENST00000589199 287 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
CTDNEP1O95476 AP001429.1-201ENST00000602568 530 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 AC004987.4-201ENST00000603383 338 ntBASIC2.22□□□□□ -2.05
CTDNEP1O95476 TUG1_1.1-201ENST00000610654 145 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 250 ms