Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 RNA5SP50-201ENST00000363731 107 ntBASIC3.22□□□□□ -1.89
LDB3O75112 Y_RNA.255-201ENST00000364581 97 ntBASIC3.22□□□□□ -1.89
LDB3O75112 MIR23B-201ENST00000384832 97 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB3O75112 RPL21P24-201ENST00000413752 448 ntBASIC3.22□□□□□ -1.89
LDB3O75112 Z99755.1-201ENST00000414048 380 ntBASIC3.22□□□□□ -1.89
LDB3O75112 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB3O75112 MTCO3P46-201ENST00000425787 232 ntBASIC3.22□□□□□ -1.89
LDB3O75112 RPL7L1P10-201ENST00000427790 463 ntBASIC3.22□□□□□ -1.89
LDB3O75112 SRIP2-201ENST00000428470 166 ntBASIC3.22□□□□□ -1.89
LDB3O75112 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB3O75112 CYCSP35-201ENST00000451978 304 ntBASIC3.22□□□□□ -1.89
LDB3O75112 HMGN2P26-201ENST00000463169 339 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AC007537.2-201ENST00000472093 511 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.22□□□□□ -1.89
LDB3O75112 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB3O75112 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
LDB3O75112 TTC39CP1-201ENST00000512513 755 ntBASIC3.22□□□□□ -1.89
LDB3O75112 SNORA70.14-201ENST00000516205 110 ntBASIC3.22□□□□□ -1.89
LDB3O75112 SNORA70.19-201ENST00000516717 90 ntBASIC3.22□□□□□ -1.89
LDB3O75112 IGKV2-26-201ENST00000518305 343 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB3O75112 FAM60DP-201ENST00000524174 632 ntBASIC3.22□□□□□ -1.89
LDB3O75112 OR4R1P-201ENST00000529879 463 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AP003072.1-201ENST00000531740 145 ntBASIC3.22□□□□□ -1.89
LDB3O75112 RPL21P12-201ENST00000559810 515 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB3O75112 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB3O75112 AC037471.2-201ENST00000564941 598 ntBASIC3.22□□□□□ -1.89
LDB3O75112 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.22□□□□□ -1.89
LDB3O75112 MIR4293-201ENST00000584305 78 ntBASIC3.22□□□□□ -1.89
LDB3O75112 RMST_8.1-201ENST00000610287 165 ntBASIC3.22□□□□□ -1.89
LDB3O75112 U7.8-201ENST00000619968 63 ntBASIC3.22□□□□□ -1.89
LDB3O75112 RMST_7.1-201ENST00000621935 268 ntBASIC3.22□□□□□ -1.89
LDB3O75112 TPTEP1-208ENST00000636884 213 ntBASIC3.22□□□□□ -1.89
LDB3O75112 MIR1302-1-201ENST00000637932 143 ntBASIC3.22□□□□□ -1.89
LDB3O75112 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
LDB3O75112 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
LDB3O75112 MTND4P35-201ENST00000604257 1375 ntBASIC3.22□□□□□ -1.89
LDB3O75112 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
LDB3O75112 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
LDB3O75112 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LDB3O75112 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
LDB3O75112 MFSD8-233ENST00000641482 4860 ntBASIC3.21□□□□□ -1.9
LDB3O75112 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB3O75112 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LDB3O75112 MTCO1P12-201ENST00000414273 1543 ntBASIC3.21□□□□□ -1.9
LDB3O75112 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
LDB3O75112 HSPE1P11-201ENST00000339579 310 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RNA5SP119-201ENST00000362715 117 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RNU6-1284P-201ENST00000363701 100 ntBASIC3.21□□□□□ -1.9
LDB3O75112 Y_RNA.326-201ENST00000365176 113 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RNU6-996P-201ENST00000365438 107 ntBASIC3.21□□□□□ -1.9
LDB3O75112 SNORD6-201ENST00000365444 73 ntBASIC3.21□□□□□ -1.9
LDB3O75112 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 Y_RNA.460-201ENST00000384255 102 ntBASIC3.21□□□□□ -1.9
LDB3O75112 Y_RNA.474-201ENST00000384341 102 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AP000567.1-201ENST00000406413 156 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AC093578.1-201ENST00000415219 368 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AL645937.1-202ENST00000421799 937 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RPL35AP12-201ENST00000425362 338 ntBASIC3.21□□□□□ -1.9
LDB3O75112 MTATP6P16-201ENST00000434543 526 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB3O75112 MTCYBP6-201ENST00000441810 138 ntBASIC3.21□□□□□ -1.9
LDB3O75112 MTCO3P45-201ENST00000443036 613 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RPL7P12-201ENST00000446719 750 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB3O75112 AC008481.1-201ENST00000463278 396 ntBASIC3.21□□□□□ -1.9
LDB3O75112 MTND4P17-201ENST00000470444 350 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RPS27AP1-201ENST00000475545 471 ntBASIC3.21□□□□□ -1.9
LDB3O75112 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.21□□□□□ -1.9
LDB3O75112 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 VN1R104P-201ENST00000505115 1009 ntBASIC3.21□□□□□ -1.9
LDB3O75112 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB3O75112 RNU4-49P-201ENST00000516080 140 ntBASIC3.21□□□□□ -1.9
LDB3O75112 SNORD27.1-201ENST00000516319 72 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RNU7-51P-201ENST00000516560 62 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RNU6-410P-201ENST00000517006 107 ntBASIC3.21□□□□□ -1.9
LDB3O75112 RNU6-1314P-201ENST00000517139 104 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.21□□□□□ -1.9
LDB3O75112 AP005597.4-201ENST00000526762 229 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AP005435.4-201ENST00000529514 284 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB3O75112 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 AF038458.1-201ENST00000588406 262 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.21□□□□□ -1.9
LDB3O75112 AC243960.4-201ENST00000600532 288 ntBASIC3.21□□□□□ -1.9
LDB3O75112 BDH2P1-201ENST00000602288 736 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AC078795.3-201ENST00000602913 472 ntBASIC3.21□□□□□ -1.9
LDB3O75112 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.21□□□□□ -1.9
LDB3O75112 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.21□□□□□ -1.9
LDB3O75112 SNHG22-203ENST00000617833 660 ntBASIC3.21□□□□□ -1.9
LDB3O75112 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LDB3O75112 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.21□□□□□ -1.9
LDB3O75112 AL160413.1-201ENST00000622780 310 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms