Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 RPS20P2-201ENST00000402520 389 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AL139397.2-201ENST00000404529 772 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AL359634.1-202ENST00000404721 284 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.42□□□□□ -2.02
HCN1O60741 AC098614.2-201ENST00000426040 255 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.42□□□□□ -2.02
HCN1O60741 ZNF863P-201ENST00000426746 417 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC244035.1-201ENST00000430042 390 ntBASIC2.42□□□□□ -2.02
HCN1O60741 MTND5P25-201ENST00000430499 799 ntBASIC2.42□□□□□ -2.02
HCN1O60741 MTCYBP39-201ENST00000437562 491 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.42□□□□□ -2.02
HCN1O60741 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.42□□□□□ -2.02
HCN1O60741 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.42□□□□□ -2.02
HCN1O60741 RPL12P25-201ENST00000455592 494 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.42□□□□□ -2.02
HCN1O60741 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HCN1O60741 SRIP1-201ENST00000489235 288 ntBASIC2.42□□□□□ -2.02
HCN1O60741 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.42□□□□□ -2.02
HCN1O60741 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.42□□□□□ -2.02
HCN1O60741 RPL37P25-201ENST00000507308 276 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.42□□□□□ -2.02
HCN1O60741 RNA5SP291-201ENST00000517222 105 ntBASIC2.42□□□□□ -2.02
HCN1O60741 DEFB108A-201ENST00000530110 222 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AL391261.3-201ENST00000557194 520 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.42□□□□□ -2.02
HCN1O60741 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.42□□□□□ -2.02
HCN1O60741 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.42□□□□□ -2.02
HCN1O60741 AL161729.4-201ENST00000604650 476 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC018638.7-201ENST00000605836 1114 ntBASIC2.42□□□□□ -2.02
HCN1O60741 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.42□□□□□ -2.02
HCN1O60741 AC116312.1-201ENST00000606841 314 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC108747.1-201ENST00000609508 535 ntBASIC2.42□□□□□ -2.02
HCN1O60741 AC004223.4-201ENST00000612426 332 ntBASIC2.42□□□□□ -2.02
HCN1O60741 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.42□□□□□ -2.02
HCN1O60741 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HCN1O60741 AC093536.2-201ENST00000565257 1406 ntBASIC2.42□□□□□ -2.02
HCN1O60741 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.42□□□□□ -2.02
HCN1O60741 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HCN1O60741 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HCN1O60741 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.41□□□□□ -2.02
HCN1O60741 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN1O60741 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HCN1O60741 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.41□□□□□ -2.02
HCN1O60741 BTF3L4P3-201ENST00000418879 476 ntBASIC2.41□□□□□ -2.02
HCN1O60741 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.41□□□□□ -2.02
HCN1O60741 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.41□□□□□ -2.02
HCN1O60741 RPS27AP14-201ENST00000422868 454 ntBASIC2.41□□□□□ -2.02
HCN1O60741 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.41□□□□□ -2.02
HCN1O60741 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN1O60741 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.41□□□□□ -2.02
HCN1O60741 AL139824.2-201ENST00000458731 1095 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC126182.1-201ENST00000478134 357 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC068587.2-201ENST00000478386 781 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.41□□□□□ -2.02
HCN1O60741 MTND5P13-201ENST00000513046 1079 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC114781.4-201ENST00000513707 639 ntBASIC2.41□□□□□ -2.02
HCN1O60741 RNU4-29P-201ENST00000515943 174 ntBASIC2.41□□□□□ -2.02
HCN1O60741 RNA5SP282-201ENST00000516355 108 ntBASIC2.41□□□□□ -2.02
HCN1O60741 RNA5SP402-201ENST00000517148 110 ntBASIC2.41□□□□□ -2.02
HCN1O60741 RNU1-104P-201ENST00000517280 175 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC100870.1-201ENST00000522035 505 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN1O60741 AC123904.2-201ENST00000548059 300 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC093012.1-202ENST00000549403 582 ntBASIC2.41□□□□□ -2.02
HCN1O60741 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.41□□□□□ -2.02
HCN1O60741 AL356432.3-201ENST00000568952 465 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN1O60741 AC090616.2-202ENST00000584248 222 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.41□□□□□ -2.02
HCN1O60741 AL049779.4-201ENST00000604500 156 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AL360219.1-201ENST00000610230 366 ntBASIC2.41□□□□□ -2.02
HCN1O60741 FTX_3.1-201ENST00000610451 147 ntBASIC2.41□□□□□ -2.02
HCN1O60741 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.41□□□□□ -2.02
HCN1O60741 AC022336.2-201ENST00000568966 2538 ntBASIC2.41□□□□□ -2.02
HCN1O60741 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.41□□□□□ -2.02
HCN1O60741 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HCN1O60741 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
HCN1O60741 RNY4P24-201ENST00000362735 96 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RNA5SP126-201ENST00000365092 109 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RNU1-138P-201ENST00000384093 164 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RNU5A-2P-201ENST00000384337 116 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RNU6-809P-201ENST00000384461 107 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.4□□□□□ -2.03
HCN1O60741 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.4□□□□□ -2.03
HCN1O60741 AL139413.1-201ENST00000421309 217 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.4□□□□□ -2.03
HCN1O60741 MTND4P20-201ENST00000424125 869 ntBASIC2.4□□□□□ -2.03
HCN1O60741 FCF1P1-201ENST00000432690 571 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RPL37P21-201ENST00000435890 276 ntBASIC2.4□□□□□ -2.03
HCN1O60741 TIMM9P1-201ENST00000436122 256 ntBASIC2.4□□□□□ -2.03
HCN1O60741 UBE2D3P1-201ENST00000436669 444 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
HCN1O60741 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.4□□□□□ -2.03
HCN1O60741 RPL23AP41-201ENST00000484754 458 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RPS3AP22-201ENST00000488297 769 ntBASIC2.4□□□□□ -2.03
HCN1O60741 RPS29P20-201ENST00000489592 171 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.4□□□□□ -2.03
HCN1O60741 MRPS33P3-201ENST00000513456 322 ntBASIC2.4□□□□□ -2.03
HCN1O60741 AC114797.1-201ENST00000514003 728 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms