Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MIR7153-201ENST00000637758 57 ntBASIC3.42□□□□□ -1.86
SLC28A2O43868 MIR1302-1-201ENST00000637932 143 ntBASIC3.42□□□□□ -1.86
SLC28A2O43868 AP000553.6-201ENST00000641242 118 ntBASIC3.42□□□□□ -1.86
SLC28A2O43868 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC28A2O43868 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SLC28A2O43868 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A2O43868 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A2O43868 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A2O43868 MTND4P35-201ENST00000604257 1375 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A2O43868 SNORA7.2-201ENST00000364446 145 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RNU6-335P-201ENST00000364563 113 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 Y_RNA.255-201ENST00000364581 97 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RNA5SP126-201ENST00000365092 109 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SLC28A2O43868 SNORA32.2-201ENST00000384049 122 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC092447.6-201ENST00000414578 210 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 MTCO2P12-201ENST00000427426 682 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 ATP5JP1-201ENST00000431631 322 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC024082.2-201ENST00000434771 238 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 NDUFA5P4-201ENST00000436704 385 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 IFNA20P-201ENST00000436840 528 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RPS29P31-201ENST00000446147 164 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A2O43868 AL356010.1-201ENST00000456364 102 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RNU7-63P-201ENST00000459054 62 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RPL31P13-201ENST00000484151 370 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AL163973.1-201ENST00000484753 577 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RPL23AP41-201ENST00000484754 458 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC096576.1-201ENST00000489014 359 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RPL38P4-201ENST00000502376 214 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC28A2O43868 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC28A2O43868 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A2O43868 SNORA19.2-201ENST00000516013 114 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RN7SKP60-201ENST00000516985 239 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 BTF3P12-201ENST00000519620 469 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 AP003497.1-201ENST00000528472 562 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 OR4P1P-201ENST00000530808 1136 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A2O43868 AC006254.3-201ENST00000603353 884 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC021646.1-201ENST00000605469 484 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AL133255.1-201ENST00000606374 441 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 XIST_intron.1-201ENST00000619444 68 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC28A2O43868 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SLC28A2O43868 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC28A2O43868 OR4G1P-203ENST00000641984 1631 ntBASIC3.41□□□□□ -1.86
SLC28A2O43868 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.4□□□□□ -1.86
SLC28A2O43868 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC28A2O43868 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SLC28A2O43868 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SLC28A2O43868 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC28A2O43868 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
SLC28A2O43868 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A2O43868 RNA5SP235-201ENST00000365411 114 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 RNU6-996P-201ENST00000365438 107 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A2O43868 MIR184-201ENST00000384962 84 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 MIR607-201ENST00000385241 96 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 RNU6-510P-201ENST00000391239 108 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 MTHFD2P2-201ENST00000407725 247 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 MTND3P8-201ENST00000412909 339 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A2O43868 BTF3L4P3-201ENST00000418879 476 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 RPL21P112-201ENST00000434403 463 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AC079781.2-201ENST00000446424 169 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.4□□□□□ -1.87
SLC28A2O43868 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A2O43868 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 AC087241.2-201ENST00000535801 324 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 SCOCP1-201ENST00000554676 349 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 MIR4738-201ENST00000579134 87 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AC060771.1-201ENST00000582031 164 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC28A2O43868 AC113139.1-201ENST00000605049 239 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 uc_338.5-201ENST00000611839 155 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC28A2O43868 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A2O43868 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC28A2O43868 AC244517.1-201ENST00000606030 2086 ntBASIC3.4□□□□□ -1.87
SLC28A2O43868 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC28A2O43868 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SLC28A2O43868 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC28A2O43868 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC28A2O43868 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC28A2O43868 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms