Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.21□□□□□ -2.06
CHMP2AO43633 RNU6-717P-201ENST00000459076 104 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 AC025033.1-201ENST00000463883 194 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 RPS27AP10-201ENST00000496103 208 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.21□□□□□ -2.06
CHMP2AO43633 RNU7-193P-201ENST00000516723 65 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.21□□□□□ -2.06
CHMP2AO43633 AL512347.1-201ENST00000566420 503 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.21□□□□□ -2.06
CHMP2AO43633 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.21□□□□□ -2.06
CHMP2AO43633 BBIP1P1-201ENST00000602999 279 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 AC098826.3-201ENST00000603823 466 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 MIR6715A-201ENST00000615929 79 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CHMP2AO43633 AL049777.1-201ENST00000622740 518 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 AC244517.12-201ENST00000623581 663 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 AC231657.1-201ENST00000624313 397 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 MIR4275-201ENST00000636486 87 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHMP2AO43633 AC013437.2-201ENST00000639587 677 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.21□□□□□ -2.06
CHMP2AO43633 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
CHMP2AO43633 RNU6-1083P-201ENST00000384022 107 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 RNU4-52P-201ENST00000384209 138 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 AL136310.1-201ENST00000404926 654 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AL117351.1-201ENST00000438864 766 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 MTND5P14-201ENST00000441481 1267 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHMP2AO43633 AC068781.1-201ENST00000488231 618 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.2□□□□□ -2.06
CHMP2AO43633 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHMP2AO43633 CYCSP2-201ENST00000558168 301 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AC007349.4-201ENST00000608114 532 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 AL138478.1-201ENST00000612252 832 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 AC107075.1-201ENST00000613695 314 ntBASIC2.2□□□□□ -2.06
CHMP2AO43633 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHMP2AO43633 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CHMP2AO43633 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHMP2AO43633 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 FAM133CP-201ENST00000332869 704 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 RNU5E-10P-201ENST00000363506 118 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 Y_RNA.192-201ENST00000363977 102 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 RNU6-1207P-201ENST00000384343 107 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHMP2AO43633 USP9YP27-201ENST00000418455 438 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.19□□□□□ -2.06
CHMP2AO43633 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.19□□□□□ -2.06
CHMP2AO43633 AC003989.2-201ENST00000440224 169 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 IPO7P1-201ENST00000442031 636 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.19□□□□□ -2.06
CHMP2AO43633 EXOSC3P1-201ENST00000448649 500 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.19□□□□□ -2.06
CHMP2AO43633 AC005410.1-202ENST00000460347 485 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 MTND4P2-201ENST00000507767 1203 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 OR6C7P-201ENST00000547875 934 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.19□□□□□ -2.06
CHMP2AO43633 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.19□□□□□ -2.06
CHMP2AO43633 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.19□□□□□ -2.06
CHMP2AO43633 NRBF2P1-201ENST00000587407 859 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.19□□□□□ -2.06
CHMP2AO43633 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.19□□□□□ -2.06
CHMP2AO43633 AL445264.1-201ENST00000621719 171 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 AC019226.1-201ENST00000625666 515 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 MIR203B-201ENST00000636080 86 ntBASIC2.19□□□□□ -2.06
CHMP2AO43633 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CHMP2AO43633 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CHMP2AO43633 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHMP2AO43633 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.18□□□□□ -2.06
CHMP2AO43633 AL356292.1-201ENST00000283110 373 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.18□□□□□ -2.06
CHMP2AO43633 RNU6-97P-201ENST00000363387 104 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 RNU6-114P-201ENST00000384704 105 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHMP2AO43633 TPMTP3-201ENST00000411928 735 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.18□□□□□ -2.06
CHMP2AO43633 AC096649.2-201ENST00000416186 393 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.18□□□□□ -2.06
CHMP2AO43633 USP9YP13-201ENST00000417797 480 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 BTF3L4P3-201ENST00000418879 476 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 EIF1AXP1-201ENST00000419267 435 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 AL445685.2-201ENST00000422551 342 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 EIF4EP4-201ENST00000424916 578 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 SKA2P1-201ENST00000425592 390 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.18□□□□□ -2.06
CHMP2AO43633 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.18□□□□□ -2.06
CHMP2AO43633 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHMP2AO43633 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.18□□□□□ -2.06
CHMP2AO43633 FABP5P13-201ENST00000452144 328 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.18□□□□□ -2.06
CHMP2AO43633 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms