Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 RNU6-960P-201ENST00000364056 120 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 SNORA75B-201ENST00000384053 137 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 RNU6-1032P-201ENST00000384100 107 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 RNU6-890P-201ENST00000384121 107 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 RNU6-1127P-201ENST00000384580 107 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 Y_RNA.557-201ENST00000384680 107 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AL109755.1-201ENST00000401791 649 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AL391417.1-201ENST00000404100 426 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 RNU2-47P-201ENST00000410649 186 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 RN7SKP58-201ENST00000411010 305 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRGAP3O43295 BX682237.1-201ENST00000415016 335 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.58□□□□□ -1.68
SRGAP3O43295 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.58□□□□□ -1.68
SRGAP3O43295 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.58□□□□□ -1.68
SRGAP3O43295 SNAP23P1-201ENST00000433229 246 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 FABP5P13-201ENST00000452144 328 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.58□□□□□ -1.68
SRGAP3O43295 HMGN1P11-201ENST00000508668 303 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 SNORA67.7-201ENST00000516664 135 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 RNU6-1016P-201ENST00000516689 94 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 DEFB108D-201ENST00000527787 222 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.58□□□□□ -1.68
SRGAP3O43295 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.58□□□□□ -1.68
SRGAP3O43295 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.58□□□□□ -1.68
SRGAP3O43295 AC008162.1-201ENST00000604718 254 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AL670379.4-201ENST00000605279 254 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AC006329.2-201ENST00000611491 394 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AL138726.1-201ENST00000614873 333 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 ATP5A1P2-202ENST00000616464 443 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 U4.1-201ENST00000620349 87 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 AC092608.2-201ENST00000624427 218 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.58□□□□□ -1.68
SRGAP3O43295 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 PNPT1P2-201ENST00000456768 2050 ntBASIC4.58□□□□□ -1.68
SRGAP3O43295 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SRGAP3O43295 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.58□□□□□ -1.68
SRGAP3O43295 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRGAP3O43295 Y_RNA.47-201ENST00000362697 108 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 RNU6-562P-201ENST00000362731 107 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 SNORA73.2-201ENST00000364946 201 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRGAP3O43295 RNU6-637P-201ENST00000384050 107 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 SNORA5A-201ENST00000384111 134 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 HSPE1P8-201ENST00000406997 288 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 Y_RNA.618-201ENST00000410949 107 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 RPL21P24-201ENST00000413752 448 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.57□□□□□ -1.68
SRGAP3O43295 CBX3P6-201ENST00000430257 527 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 GOT2P5-201ENST00000433995 546 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.57□□□□□ -1.68
SRGAP3O43295 AC010655.1-201ENST00000449336 292 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 HMGB3P21-201ENST00000452483 547 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 DYNLL1P5-201ENST00000467158 270 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 RN7SL432P-201ENST00000484057 298 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.57□□□□□ -1.68
SRGAP3O43295 AC079140.5-201ENST00000507882 310 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AC005798.1-201ENST00000513715 387 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 SNORA25.10-201ENST00000515926 124 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 HMGN1P28-201ENST00000521340 364 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.57□□□□□ -1.68
SRGAP3O43295 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.57□□□□□ -1.68
SRGAP3O43295 MIR3158-1-201ENST00000583596 81 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 U2.17-201ENST00000611454 95 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AC006157.1-201ENST00000611750 366 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 MIR486-1-201ENST00000612171 68 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AC011890.2-201ENST00000613393 294 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AL162373.1-201ENST00000620433 407 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 AC098657.3-201ENST00000620434 263 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 Z69720.2-201ENST00000624755 279 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.57□□□□□ -1.68
SRGAP3O43295 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.57□□□□□ -1.68
SRGAP3O43295 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRGAP3O43295 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SRGAP3O43295 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SRGAP3O43295 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SRGAP3O43295 RNU6-593P-201ENST00000364716 112 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 RNU6-702P-201ENST00000364982 107 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 SNORA62.3-201ENST00000365110 153 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SRGAP3O43295 HMGN2P8-201ENST00000391458 268 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 SNORA11-201ENST00000408789 128 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.56□□□□□ -1.68
SRGAP3O43295 RPL31P2-201ENST00000413849 377 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC009302.1-201ENST00000417147 390 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 SYF2P2-201ENST00000417620 583 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC018865.2-201ENST00000423631 129 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 CALM2P2-201ENST00000428512 440 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.56□□□□□ -1.68
SRGAP3O43295 RPL21P112-201ENST00000434403 463 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.56□□□□□ -1.68
SRGAP3O43295 PPIAP3-201ENST00000450588 505 ntBASIC4.56□□□□□ -1.68
SRGAP3O43295 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.56□□□□□ -1.68
SRGAP3O43295 AC104472.2-201ENST00000469035 601 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms