Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AL592114.1-201ENST00000403842 483 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 RNU4-26P-201ENST00000410270 107 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN1O15353 AC005517.2-201ENST00000424673 553 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC002075.2-201ENST00000425207 252 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN1O15353 DDX3P2-201ENST00000446138 111 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC079781.2-201ENST00000446424 169 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 GMFBP1-201ENST00000467831 427 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC004062.1-201ENST00000509926 645 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN1O15353 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN1O15353 PTP4A1P4-201ENST00000512479 322 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN1O15353 AC093303.1-201ENST00000514549 295 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 RNU4-29P-201ENST00000515943 174 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 RNA5SP356-201ENST00000515972 94 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 Y_RNA.665-201ENST00000516177 98 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 RNU6-410P-201ENST00000517006 107 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN1O15353 RPL7P20-201ENST00000520308 745 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN1O15353 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXN1O15353 SNRPGP18-201ENST00000553000 214 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC004817.2-201ENST00000561794 651 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 MIR4435-1-201ENST00000582552 80 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AL022345.1-201ENST00000607292 135 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXN1O15353 ATP5A1P2-202ENST00000616464 443 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC131238.1-201ENST00000617135 328 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC244517.12-201ENST00000623581 663 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXN1O15353 MTND4P1-201ENST00000457501 1466 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN1O15353 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXN1O15353 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.15□□□□□ -1.75
FOXN1O15353 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
FOXN1O15353 SAGE2P-201ENST00000420011 2126 ntBASIC4.15□□□□□ -1.75
FOXN1O15353 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FOXN1O15353 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXN1O15353 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FOXN1O15353 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
FOXN1O15353 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
FOXN1O15353 Y_RNA.28-201ENST00000362554 111 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 Y_RNA.100-201ENST00000363141 102 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 Y_RNA.193-201ENST00000363979 102 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 Y_RNA.339-201ENST00000365325 102 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 RNU6-784P-201ENST00000384330 106 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 RNU6-146P-201ENST00000384602 108 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 RNU6-606P-201ENST00000384721 111 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 CISD1P1-201ENST00000393907 327 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AL359634.1-202ENST00000404721 284 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AC003685.2-201ENST00000422795 395 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AL031736.2-201ENST00000426573 787 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 SNRPEP4-201ENST00000435815 279 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXN1O15353 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXN1O15353 HMGN3P1-201ENST00000453847 193 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 Y_RNA.635-201ENST00000459041 101 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXN1O15353 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.14□□□□□ -1.75
FOXN1O15353 AL135752.1-201ENST00000479477 471 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 RPL21P99-201ENST00000480369 423 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 RPL30P11-201ENST00000495304 339 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 MTCO1P29-201ENST00000496868 288 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 FAM206BP-201ENST00000510179 541 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 RNU6-264P-201ENST00000517134 104 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AC107918.3-201ENST00000533272 382 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXN1O15353 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.14□□□□□ -1.75
FOXN1O15353 AL117187.1-201ENST00000555482 181 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 KLKP1-201ENST00000595979 403 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.14□□□□□ -1.75
FOXN1O15353 RPL23AP92-201ENST00000603609 255 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AP000654.2-201ENST00000605633 586 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXN1O15353 MIR7111-201ENST00000619751 72 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 AC244205.2-202ENST00000635781 342 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
FOXN1O15353 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
FOXN1O15353 AL359693.1-201ENST00000614959 2407 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
FOXN1O15353 DDX18P3-201ENST00000404856 2007 ntBASIC4.14□□□□□ -1.75
FOXN1O15353 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.13□□□□□ -1.75
FOXN1O15353 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN1O15353 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN1O15353 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
FOXN1O15353 Y_RNA.187-201ENST00000363918 113 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 RNU6-193P-201ENST00000410977 107 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FOXN1O15353 MTCYBP9-201ENST00000431021 303 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.13□□□□□ -1.75
FOXN1O15353 AP1S2P1-201ENST00000457344 379 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 MTCO3P2-201ENST00000457365 171 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 AP002884.2-201ENST00000471647 395 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 TRBV12-1-201ENST00000479785 344 ntBASIC4.13□□□□□ -1.75
FOXN1O15353 RNU6-988P-201ENST00000519081 107 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms