Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RN7SKP220-201ENST00000410611 288 ntBASIC3.01□□□□□ -1.93
TO15178 RN7SKP123-201ENST00000410732 291 ntBASIC3.01□□□□□ -1.93
TO15178 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.01□□□□□ -1.93
TO15178 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 AC005300.1-201ENST00000428401 373 ntBASIC3.01□□□□□ -1.93
TO15178 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.01□□□□□ -1.93
TO15178 RPL23AP30-201ENST00000432419 501 ntBASIC3.01□□□□□ -1.93
TO15178 CST9LP2-201ENST00000437612 320 ntBASIC3.01□□□□□ -1.93
TO15178 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 NANOGNBP1-201ENST00000448444 480 ntBASIC3.01□□□□□ -1.93
TO15178 PRSS3P4-201ENST00000453323 162 ntBASIC3.01□□□□□ -1.93
TO15178 AC011825.1-201ENST00000484967 388 ntBASIC3.01□□□□□ -1.93
TO15178 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 RPL39P36-201ENST00000490784 156 ntBASIC3.01□□□□□ -1.93
TO15178 AC079382.1-201ENST00000493346 557 ntBASIC3.01□□□□□ -1.93
TO15178 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 HSPD1P15-201ENST00000505573 1122 ntBASIC3.01□□□□□ -1.93
TO15178 AC116562.3-201ENST00000506136 177 ntBASIC3.01□□□□□ -1.93
TO15178 AC009901.1-201ENST00000506703 541 ntBASIC3.01□□□□□ -1.93
TO15178 RPL37P25-201ENST00000507308 276 ntBASIC3.01□□□□□ -1.93
TO15178 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.01□□□□□ -1.93
TO15178 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.01□□□□□ -1.93
TO15178 AC068587.5-201ENST00000528506 175 ntBASIC3.01□□□□□ -1.93
TO15178 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 AC098826.3-201ENST00000603823 466 ntBASIC3.01□□□□□ -1.93
TO15178 AL022154.1-201ENST00000604698 785 ntBASIC3.01□□□□□ -1.93
TO15178 AL121992.2-201ENST00000606262 256 ntBASIC3.01□□□□□ -1.93
TO15178 AL161629.2-201ENST00000615347 275 ntBASIC3.01□□□□□ -1.93
TO15178 AL359740.1-201ENST00000624340 592 ntBASIC3.01□□□□□ -1.93
TO15178 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.01□□□□□ -1.93
TO15178 MTND5P42-201ENST00000637720 498 ntBASIC3.01□□□□□ -1.93
TO15178 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
TO15178 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
TO15178 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TO15178 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.01□□□□□ -1.93
TO15178 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.01□□□□□ -1.93
TO15178 MTND5P29-201ENST00000458676 1807 ntBASIC3□□□□□ -1.93
TO15178 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
TO15178 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3□□□□□ -1.93
TO15178 AC008264.2-201ENST00000610193 3731 ntBASIC3□□□□□ -1.93
TO15178 RNU6-179P-201ENST00000363350 107 ntBASIC3□□□□□ -1.93
TO15178 RN7SKP226-201ENST00000364912 300 ntBASIC3□□□□□ -1.93
TO15178 RNU6-74P-201ENST00000384235 107 ntBASIC3□□□□□ -1.93
TO15178 RNVU1-14-201ENST00000384770 164 ntBASIC3□□□□□ -1.93
TO15178 U3.19-201ENST00000390893 196 ntBASIC3□□□□□ -1.93
TO15178 AL031121.1-201ENST00000406553 254 ntBASIC3□□□□□ -1.93
TO15178 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3□□□□□ -1.93
TO15178 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3□□□□□ -1.93
TO15178 RPS12P24-201ENST00000412619 387 ntBASIC3□□□□□ -1.93
TO15178 AC114491.1-201ENST00000416095 246 ntBASIC3□□□□□ -1.93
TO15178 AL645937.1-202ENST00000421799 937 ntBASIC3□□□□□ -1.93
TO15178 ZNF863P-201ENST00000426746 417 ntBASIC3□□□□□ -1.93
TO15178 MTATP6P16-201ENST00000434543 526 ntBASIC3□□□□□ -1.93
TO15178 AC002486.1-201ENST00000435098 391 ntBASIC3□□□□□ -1.93
TO15178 MTND1P34-201ENST00000438556 671 ntBASIC3□□□□□ -1.93
TO15178 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3□□□□□ -1.93
TO15178 Z96811.1-201ENST00000445880 108 ntBASIC3□□□□□ -1.93
TO15178 HMGN1P18-201ENST00000457642 277 ntBASIC3□□□□□ -1.93
TO15178 AC093899.1-201ENST00000457984 376 ntBASIC3□□□□□ -1.93
TO15178 LAMTOR3P2-201ENST00000504479 232 ntBASIC3□□□□□ -1.93
TO15178 AC074250.1-201ENST00000511117 192 ntBASIC3□□□□□ -1.93
TO15178 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3□□□□□ -1.93
TO15178 RNU6-720P-201ENST00000516363 108 ntBASIC3□□□□□ -1.93
TO15178 RNU6-143P-201ENST00000516942 93 ntBASIC3□□□□□ -1.93
TO15178 FAM92A1P1-201ENST00000528023 890 ntBASIC3□□□□□ -1.93
TO15178 OR4R1P-201ENST00000529879 463 ntBASIC3□□□□□ -1.93
TO15178 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3□□□□□ -1.93
TO15178 AMZ2P1-203ENST00000565833 850 ntBASIC3□□□□□ -1.93
TO15178 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3□□□□□ -1.93
TO15178 AC136601.2-201ENST00000604356 474 ntBASIC3□□□□□ -1.93
TO15178 AL162713.1-201ENST00000604480 262 ntBASIC3□□□□□ -1.93
TO15178 AL161798.1-201ENST00000604630 131 ntBASIC3□□□□□ -1.93
TO15178 AC007684.1-201ENST00000609671 477 ntBASIC3□□□□□ -1.93
TO15178 AC002064.3-201ENST00000623448 346 ntBASIC3□□□□□ -1.93
TO15178 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3□□□□□ -1.93
TO15178 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3□□□□□ -1.93
TO15178 AC084035.1-201ENST00000634543 607 ntBASIC3□□□□□ -1.93
TO15178 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3□□□□□ -1.93
TO15178 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3□□□□□ -1.93
TO15178 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TO15178 MTND5P17-201ENST00000418405 1603 ntBASIC3□□□□□ -1.93
TO15178 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TO15178 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
TO15178 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TO15178 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TO15178 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TO15178 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TO15178 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.99□□□□□ -1.93
TO15178 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TO15178 MIR148B-201ENST00000362252 99 ntBASIC2.99□□□□□ -1.93
TO15178 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
TO15178 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
TO15178 RNU6-190P-201ENST00000384154 102 ntBASIC2.99□□□□□ -1.93
TO15178 SNORA24.1-201ENST00000384401 135 ntBASIC2.99□□□□□ -1.93
TO15178 RNU6-1035P-201ENST00000384477 107 ntBASIC2.99□□□□□ -1.93
TO15178 RNU6-140P-201ENST00000384566 108 ntBASIC2.99□□□□□ -1.93
TO15178 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
TO15178 RNU4-47P-201ENST00000410876 114 ntBASIC2.99□□□□□ -1.93
TO15178 RNA5SP120-201ENST00000410900 112 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms