Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM1O00151 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM1O00151 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM1O00151 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.59□□□□□ -1.99
PDLIM1O00151 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.59□□□□□ -1.99
PDLIM1O00151 AC135628.1-201ENST00000568867 534 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 ZNF861P-201ENST00000588126 639 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AL022161.1-201ENST00000604390 213 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC092354.1-201ENST00000606057 376 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AL031775.1-201ENST00000607014 887 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC012360.2-201ENST00000609349 391 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM1O00151 UCA1.1-201ENST00000620952 75 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC097520.1-201ENST00000624435 385 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM1O00151 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDLIM1O00151 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
PDLIM1O00151 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PDLIM1O00151 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
PDLIM1O00151 Y_RNA.608-201ENST00000410647 95 ntBASIC2.58□□□□□ -2
PDLIM1O00151 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
PDLIM1O00151 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.58□□□□□ -2
PDLIM1O00151 MORF4L1P6-201ENST00000418771 268 ntBASIC2.58□□□□□ -2
PDLIM1O00151 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.58□□□□□ -2
PDLIM1O00151 CETN4P-201ENST00000432407 469 ntBASIC2.58□□□□□ -2
PDLIM1O00151 AL445567.1-201ENST00000439121 144 ntBASIC2.58□□□□□ -2
PDLIM1O00151 AL513043.1-201ENST00000439124 535 ntBASIC2.58□□□□□ -2
PDLIM1O00151 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM1O00151 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 AC138853.1-201ENST00000503549 823 ntBASIC2.58□□□□□ -2
PDLIM1O00151 AC091826.1-201ENST00000514065 313 ntBASIC2.58□□□□□ -2
PDLIM1O00151 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 AC107934.1-201ENST00000522215 217 ntBASIC2.58□□□□□ -2
PDLIM1O00151 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 AC022080.3-201ENST00000544433 482 ntBASIC2.58□□□□□ -2
PDLIM1O00151 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.58□□□□□ -2
PDLIM1O00151 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.58□□□□□ -2
PDLIM1O00151 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.58□□□□□ -2
PDLIM1O00151 AC239868.4-201ENST00000608318 671 ntBASIC2.58□□□□□ -2
PDLIM1O00151 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDLIM1O00151 AC006338.1-201ENST00000618453 749 ntBASIC2.58□□□□□ -2
PDLIM1O00151 AC010680.1-201ENST00000590024 3590 ntBASIC2.58□□□□□ -2
PDLIM1O00151 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.58□□□□□ -2
PDLIM1O00151 AC092104.1-201ENST00000497346 1441 ntBASIC2.58□□□□□ -2
PDLIM1O00151 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDLIM1O00151 AC022336.2-201ENST00000568966 2538 ntBASIC2.58□□□□□ -2
PDLIM1O00151 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 Y_RNA.245-201ENST00000364493 95 ntBASIC2.57□□□□□ -2
PDLIM1O00151 RNU6-701P-201ENST00000384059 107 ntBASIC2.57□□□□□ -2
PDLIM1O00151 RNU6-217P-201ENST00000384164 104 ntBASIC2.57□□□□□ -2
PDLIM1O00151 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.57□□□□□ -2
PDLIM1O00151 RNA5SP210-201ENST00000391034 120 ntBASIC2.57□□□□□ -2
PDLIM1O00151 SNORD115.1-201ENST00000391109 76 ntBASIC2.57□□□□□ -2
PDLIM1O00151 MRPL42P2-201ENST00000403169 426 ntBASIC2.57□□□□□ -2
PDLIM1O00151 NDUFS5P1-201ENST00000405668 289 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.57□□□□□ -2
PDLIM1O00151 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 AL356583.2-201ENST00000426536 280 ntBASIC2.57□□□□□ -2
PDLIM1O00151 HMGB1P27-201ENST00000431429 603 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC107083.1-201ENST00000439643 279 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM1O00151 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDLIM1O00151 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM1O00151 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM1O00151 RPL12P25-201ENST00000455592 494 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC013267.1-201ENST00000458227 267 ntBASIC2.57□□□□□ -2
PDLIM1O00151 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 RBM43P1-201ENST00000476891 1081 ntBASIC2.57□□□□□ -2
PDLIM1O00151 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.57□□□□□ -2
PDLIM1O00151 RN7SKP258-201ENST00000517151 304 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.57□□□□□ -2
PDLIM1O00151 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDLIM1O00151 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.57□□□□□ -2
PDLIM1O00151 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM1O00151 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.57□□□□□ -2
PDLIM1O00151 AC103810.1-201ENST00000579873 453 ntBASIC2.57□□□□□ -2
PDLIM1O00151 MIR3118-1-201ENST00000581787 76 ntBASIC2.57□□□□□ -2
PDLIM1O00151 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC005498.1-201ENST00000592125 465 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AL451007.1-201ENST00000595491 289 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AF131215.7-201ENST00000602443 707 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC136601.2-201ENST00000604356 474 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AL137843.1-201ENST00000605078 385 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AP000860.1-201ENST00000605250 559 ntBASIC2.57□□□□□ -2
PDLIM1O00151 RNU6-87P-201ENST00000607561 108 ntBASIC2.57□□□□□ -2
PDLIM1O00151 uc_338.12-201ENST00000616344 181 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC104010.1-201ENST00000616889 150 ntBASIC2.57□□□□□ -2
PDLIM1O00151 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms