Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 TRBVA-201ENST00000498804 316 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 MTND3P22-201ENST00000510932 243 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC021146.3-201ENST00000511911 260 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 MIR892C-201ENST00000516410 77 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 TRMT10BP1-201ENST00000519377 943 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 IGLV3-26-201ENST00000520756 302 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RNU6-323P-201ENST00000521915 107 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 RAB11AP2-201ENST00000545905 639 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 TRAV37-201ENST00000553906 342 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 LRRC37A5P-203ENST00000580181 585 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 MIR3942-201ENST00000585264 109 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 FTX_3.1-201ENST00000610451 147 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 TPTEP1-208ENST00000636884 213 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 U6.99-201ENST00000637524 83 ntBASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
MBD3L4A6NDZ8 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 SNORA63.1-201ENST00000362493 131 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 MT-TD-201ENST00000387419 68 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RPL21P17-201ENST00000397467 475 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 SNORA3C-201ENST00000408792 125 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 SNORA57.3-201ENST00000411095 141 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RNU6-607P-201ENST00000411283 108 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 HMGN2P30-201ENST00000423237 256 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 MYL8P-204ENST00000431574 518 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 HMGN2P7-201ENST00000456186 273 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RPL21P11-201ENST00000461458 483 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RN7SL323P-201ENST00000494712 295 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC079140.5-201ENST00000507882 310 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC017037.1-201ENST00000508460 471 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC006499.6-201ENST00000511169 607 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RNU6-864P-201ENST00000516256 108 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 RNU6-256P-201ENST00000516747 97 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 CYCSP27-201ENST00000527643 293 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AP000889.2-201ENST00000532684 490 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 CYP4A43P-201ENST00000568156 121 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 MIR5692C1-201ENST00000585309 91 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 NUTF2P8-201ENST00000604593 363 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC012531.5-201ENST00000611375 151 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 MIR7154-201ENST00000620673 73 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 FP236240.3-201ENST00000623061 327 ntBASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
MBD3L4A6NDZ8 AC022336.2-201ENST00000568966 2538 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 AC007256.1-201ENST00000392253 2765 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 RNA5SP124-201ENST00000362739 110 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 RNU6-254P-201ENST00000363377 107 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 Y_RNA.184-201ENST00000363884 108 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 MIR30B-201ENST00000384850 88 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 MIR450B-201ENST00000401182 78 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 AL122016.1-201ENST00000403365 367 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 RN7SKP156-201ENST00000410308 342 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 Y_RNA.623-201ENST00000411128 95 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 RAB9AP3-201ENST00000412737 573 ntBASIC3.5□□□□□ -1.85
MBD3L4A6NDZ8 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms