Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
CNOT1A5YKK6 UBE2V1P9-201ENST00000414760 368 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.86□□□□□ -2.27
CNOT1A5YKK6 SNORA48.9-201ENST00000516419 162 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 CASP1P1-201ENST00000526345 212 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CNOT1A5YKK6 AC100821.1-201ENST00000523153 2479 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 MIR409-201ENST00000362237 79 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 Y_RNA.142-201ENST00000363491 102 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 AL512604.1-201ENST00000404812 257 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.86□□□□□ -2.27
CNOT1A5YKK6 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.86□□□□□ -2.27
CNOT1A5YKK6 AC091304.6-201ENST00000619761 202 ntBASIC0.86□□□□□ -2.27
CNOT1A5YKK6 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.86□□□□□ -2.27
CNOT1A5YKK6 SNORA62.1-201ENST00000364287 154 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 SNORA16B-201ENST00000364674 135 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 RNU4-42P-201ENST00000364738 142 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 Y_RNA.324-201ENST00000365165 102 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 RPS20P15-201ENST00000412792 311 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 SNORD97-201ENST00000459187 142 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC022880.1-201ENST00000534017 973 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 MTCYBP23-201ENST00000558717 1102 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC012557.2-201ENST00000605919 418 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 MIR6864-201ENST00000617935 70 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC067863.3-201ENST00000624172 122 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC068620.4-201ENST00000636730 1182 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC008555.8-201ENST00000623602 2168 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 RNA5SP498-201ENST00000411342 120 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC092745.2-202ENST00000411880 369 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 VN1R36P-201ENST00000414936 291 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 OR51A5P-201ENST00000415429 942 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 MTND5P25-201ENST00000430499 799 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 RPS27P1-201ENST00000450552 247 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.85□□□□□ -2.27
CNOT1A5YKK6 NDUFB4P2-201ENST00000509515 391 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 PRELID3BP4-201ENST00000515476 571 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 SNORA31.8-201ENST00000516327 108 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC008269.2-201ENST00000561915 1105 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AL096840.1-201ENST00000603287 93 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC138473.1-201ENST00000605717 526 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 MIR6835-201ENST00000621552 64 ntBASIC0.85□□□□□ -2.27
CNOT1A5YKK6 AC073544.1-201ENST00000600110 1595 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 RNU1-62P-201ENST00000362599 164 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 MIR147B-201ENST00000390185 80 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 AC019070.1-201ENST00000415008 1024 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 NAP1L1P3-201ENST00000462291 880 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 AC108120.2-201ENST00000512973 294 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CNOT1A5YKK6 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CNOT1A5YKK6 MTND4P27-201ENST00000450813 1354 ntBASIC0.84□□□□□ -2.27
CNOT1A5YKK6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 MTCYBP29-201ENST00000436327 1006 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 Z77249.1-201ENST00000444622 1175 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 snoU13.7-201ENST00000459220 104 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 RPS20P20-201ENST00000460498 340 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 RPL31P58-201ENST00000469001 379 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AC055731.1-201ENST00000474387 401 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AL355812.1-201ENST00000603215 216 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AC007038.2-201ENST00000608095 740 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC0.84□□□□□ -2.28
CNOT1A5YKK6 MIR7515-201ENST00000637837 67 ntBASIC0.84□□□□□ -2.28
CNOT1A5YKK6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 SNORA2A-201ENST00000383885 135 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 RNU6-72P-201ENST00000384285 79 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 MIR1250-201ENST00000408098 113 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 HMGB1P9-201ENST00000429856 646 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC005410.1-202ENST00000460347 485 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC104108.1-201ENST00000509930 412 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC112198.4-201ENST00000515450 351 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 MIR4529-201ENST00000578110 78 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AL627230.6-201ENST00000611129 280 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
CNOT1A5YKK6 MIR150-201ENST00000385048 84 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 RNU6-1197P-201ENST00000391183 107 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 RNU2-70P-201ENST00000410718 179 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AL133384.1-201ENST00000412744 351 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 OR6C66P-201ENST00000414917 930 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AL591704.2-201ENST00000421658 181 ntBASIC0.83□□□□□ -2.28
CNOT1A5YKK6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms