Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 UBL5P3-201ENST00000475112 231 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC008628.1-201ENST00000508663 265 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 MRPS17P9-201ENST00000511924 393 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-840P-201ENST00000517275 65 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC007151.1-201ENST00000572774 483 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 MIR4529-201ENST00000578110 78 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC022662.1-201ENST00000580252 331 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 NRBF2P1-201ENST00000587407 859 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AL391813.1-201ENST00000603098 260 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AL138478.1-201ENST00000612252 832 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC024257.5-201ENST00000612739 531 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC008759.3-201ENST00000613300 508 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AL357080.1-201ENST00000617394 239 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 DUXAP9-208ENST00000622815 614 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 MTND5P30-201ENST00000452896 1731 ntBASIC1.49□□□□□ -2.17
TRAV41A0A0B4J266 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC011477.1-204ENST00000623416 1325 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-1078P-201ENST00000364522 103 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 MIR218-1-201ENST00000384999 110 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AL512604.1-201ENST00000404812 257 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 U6atac.2-201ENST00000408644 118 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 USP9YP21-201ENST00000420603 432 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 ZYG11AP1-201ENST00000430329 837 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 MTCO1P42-201ENST00000457379 726 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 snoU13.8-201ENST00000458890 104 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 snoU13.26-201ENST00000459452 105 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC092902.1-201ENST00000486999 259 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 HMGB1P36-201ENST00000487709 576 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 RPS27AP10-201ENST00000496103 208 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 RNA5SP182-201ENST00000516064 82 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 OR5AQ1P-201ENST00000527596 927 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AL139344.1-201ENST00000605228 195 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC093673.2-201ENST00000609674 331 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 AC008555.8-201ENST00000623602 2168 ntBASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV41A0A0B4J266 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 Y_RNA.110-201ENST00000363220 99 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 snoZ40.1-201ENST00000364540 72 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-359P-201ENST00000365466 108 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-1207P-201ENST00000384343 107 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 RNU6-114P-201ENST00000384704 105 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AL030996.1-201ENST00000411430 235 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 TPMTP3-201ENST00000411928 735 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 BPY2DP-201ENST00000422208 265 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 BX276092.3-201ENST00000424182 230 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 SKA2P1-201ENST00000425592 390 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC010153.1-201ENST00000432862 727 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AL121890.1-201ENST00000435457 205 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC098831.1-201ENST00000440661 216 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 snoU13.15-201ENST00000459407 104 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 TRBV1-201ENST00000476502 284 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 YWHAEP4-201ENST00000505390 198 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 LTV1P1-201ENST00000510683 1237 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 MTND2P31-201ENST00000512602 616 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 MIR3912-201ENST00000577566 105 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC105245.1-201ENST00000581934 244 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC068790.3-201ENST00000602988 553 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 RPP40P2-201ENST00000603596 712 ntBASIC1.47□□□□□ -2.17
TRAV41A0A0B4J266 AC068276.1-201ENST00000605793 379 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms